Information for 18-CACGCGTCATCGC (Motif 40)

A G T C T C G A A T G C A T C G A T G C C A T G G A C T G T A C G T C A A C G T A T G C C T A G T A G C
Reverse Opposite:
A C T G A G T C A T C G G T C A A C G T A C T G C T G A G A T C T A C G T A G C T A C G A C G T A C T G
p-value:1e-6
log p-value:-1.548e+01
Information Content per bp:1.688
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif85.3
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets53.9 +/- 23.3bp
Average Position of motif in Background46.0 +/- 41.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes1/MA1099.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACGCGTCATCGC
GGCACGCGTC-----
 A C G T A C G T A G T C T C G A A T G C A T C G A T G C C A T G G A C T G T A C G T C A A C G T A T G C C T A G T A G C
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CACGCGTCATCGC
GTGCCACGCGACTG---
 A C G T A C G T A C G T A C G T A G T C T C G A A T G C A T C G A T G C C A T G G A C T G T A C G T C A A C G T A T G C C T A G T A G C
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CACGCGTCATCGC
CACGCA-------
 A G T C T C G A A T G C A T C G A T G C C A T G G A C T G T A C G T C A A C G T A T G C C T A G T A G C
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CACGCGTCATCGC
---ACGTCATC--
 A G T C T C G A A T G C A T C G A T G C C A T G G A C T G T A C G T C A A C G T A T G C C T A G T A G C
A C G T A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACGCGTCATCGC-
CGTCACGCATGACTGCA
 A C G T A C G T A C G T A G T C T C G A A T G C A T C G A T G C C A T G G A C T G T A C G T C A A C G T A T G C C T A G T A G C A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CACGCGTCATCGC
-----GTCATN--
 A G T C T C G A A T G C A T C G A T G C C A T G G A C T G T A C G T C A A C G T A T G C C T A G T A G C
A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACGCGTCATCGC-
CGTCACGCATGACTGCA
 A C G T A C G T A C G T A G T C T C G A A T G C A T C G A T G C C A T G G A C T G T A C G T C A A C G T A T G C C T A G T A G C A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

HEY2/MA0649.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CACGCGTCATCGC
GGCACGTGNC-----
 A C G T A C G T A G T C T C G A A T G C A T C G A T G C C A T G G A C T G T A C G T C A A C G T A T G C C T A G T A G C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CACGCGTCATCGC--
GARTGGTCATCGCCC
 A G T C T C G A A T G C A T C G A T G C C A T G G A C T G T A C G T C A A C G T A T G C C T A G T A G C A C G T A C G T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

HEY1/MA0823.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACGCGTCATCGC
GACACGTGCC-----
 A C G T A C G T A G T C T C G A A T G C A T C G A T G C C A T G G A C T G T A C G T C A A C G T A T G C C T A G T A G C
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T A C G T A C G T A C G T