Information for 9-TGGCCGAGCT (Motif 34)

A G C T A C T G C T A G T A G C T A G C C A T G T G C A T C A G T G A C A C G T
Reverse Opposite:
T G C A A C T G A G T C A C G T G T A C A T C G A T C G G A T C T G A C T C G A
p-value:1e-7
log p-value:-1.712e+01
Information Content per bp:1.652
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif7.45%
Number of Background Sequences with motif1095.3
Percentage of Background Sequences with motif2.95%
Average Position of motif in Targets48.4 +/- 23.9bp
Average Position of motif in Background51.4 +/- 39.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGGCCGAGCT
GAGSCCGAGC-
 A C G T A G C T A C T G C T A G T A G C T A G C C A T G T G C A T C A G T G A C A C G T
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGGCCGAGCT
RGKGGGCGGAGC-
 A C G T A C G T A C G T A G C T A C T G C T A G T A G C T A G C C A T G T G C A T C A G T G A C A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGCCGAGCT
TGACCTARTT
 A G C T A C T G C T A G T A G C T A G C C A T G T G C A T C A G T G A C A C G T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGGCCGAGCT
---CGGAGC-
 A G C T A C T G C T A G T A G C T A G C C A T G T G C A T C A G T G A C A C G T
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGCCGAGCT
AGGCCTAG--
 A G C T A C T G C T A G T A G C T A G C C A T G T G C A T C A G T G A C A C G T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGGCCGAGCT-
------NGCTN
 A G C T A C T G C T A G T A G C T A G C C A T G T G C A T C A G T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCCGAGCT--
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G T A G C T A G C C A T G T G C A T C A G T G A C A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGGCCGAGCT-
AGGGGGCGGGGCTG
 A C G T A C G T A C G T A G C T A C T G C T A G T A G C T A G C C A T G T G C A T C A G T G A C A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGGCCGAGCT
TTGGCA-----
 A C G T A G C T A C T G C T A G T A G C T A G C C A T G T G C A T C A G T G A C A C G T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCGAGCT---
TTGACCTANTTATN
 A C G T A G C T A C T G C T A G T A G C T A G C C A T G T G C A T C A G T G A C A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A