Information for 7-CGCGAAGGTC (Motif 29)

A G T C A C T G A G T C A T C G G T C A C G T A C A T G A C T G C G A T A G T C
Reverse Opposite:
A C T G G C T A A G T C G T A C A C G T A C G T A T G C A C T G A G T C A C T G
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.854
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.4 +/- 17.4bp
Average Position of motif in Background47.2 +/- 44.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CGCGAAGGTC--
GCCGCGCAGTGCGT
 A C G T A C G T A G T C A C T G A G T C A T C G G T C A C G T A C A T G A C T G C G A T A G T C A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0161.1_Rxra_2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGCGAAGGTC-----
TCGCGAAGGTTGTACT
 A C G T A G T C A C T G A G T C A T C G G T C A C G T A C A T G A C T G C G A T A G T C A C G T A C G T A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGCGAAGGTC--
--TCAAGGTCAT
 A G T C A C T G A G T C A T C G G T C A C G T A C A T G A C T G C G A T A G T C A C G T A C G T
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGCGAAGGTC--
--TCAAGGTCAN
 A G T C A C T G A G T C A T C G G T C A C G T A C A T G A C T G C G A T A G T C A C G T A C G T
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGCGAAGGTC------
TATTCAAGGTCATGCGA
 A C G T A G T C A C T G A G T C A T C G G T C A C G T A C A T G A C T G C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGCGAAGGTC--
--CAAAGGTCAG
 A G T C A C T G A G T C A T C G G T C A C G T A C A T G A C T G C G A T A G T C A C G T A C G T
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGCGAAGGTC
TTCGCGCGAAAA--
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A T C G G T C A C G T A C A T G A C T G C G A T A G T C
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGCGAAGGTC-
-BTCAAGGTCA
 A G T C A C T G A G T C A T C G G T C A C G T A C A T G A C T G C G A T A G T C A C G T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGCGAAGGTC-
-NTCAAGGTCA
 A G T C A C T G A G T C A T C G G T C A C G T A C A T G A C T G C G A T A G T C A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGCGAAGGTC--
----AAGGTCAC
 A G T C A C T G A G T C A T C G G T C A C G T A C A T G A C T G C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C