Information for 7-GCAGTGGTANCAC (Motif 19)

A C T G T A G C T G C A A C T G A C G T C T A G A C T G A C G T G T C A G A T C A G T C C G T A A G T C
Reverse Opposite:
A C T G C G A T A C T G C A T G A C G T G T C A A G T C A G T C C G T A A G T C A C G T A T C G T G A C
p-value:1e-9
log p-value:-2.286e+01
Information Content per bp:1.783
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets39.8 +/- 21.1bp
Average Position of motif in Background41.6 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCAGTGGTANCAC
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C T G T A G C T G C A A C T G A C G T C T A G A C T G A C G T G T C A G A T C A G T C C G T A A G T C
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PH0162.1_Six2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCAGTGGTANCAC----
AATGGGGTATCACGTTT
 A C T G T A G C T G C A A C T G A C G T C T A G A C T G A C G T G T C A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCAGTGGTANCAC----
AATAGGGTATCATATAT
 A C T G T A G C T G C A A C T G A C G T C T A G A C T G A C G T G T C A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0161.1_Six1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAGTGGTANCAC----
GATGGGGTATCATTTTT
 A C T G T A G C T G C A A C T G A C G T C T A G A C T G A C G T G T C A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCAGTGGTANCAC--
-----GGGAGGACNG
 A C T G T A G C T G C A A C T G A C G T C T A G A C T G A C G T G T C A G A T C A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Six3/MA0631.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAGTGGTANCAC----
GATAGGGTATCACTAAT
 A C T G T A G C T G C A A C T G A C G T C T A G A C T G A C G T G T C A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAGTGGTANCAC----
GATAGGGTATCACTAAT
 A C T G T A G C T G C A A C T G A C G T C T A G A C T G A C G T G T C A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTGGTANCAC
NTCAAGTGGN-----
 A C G T A C G T A C T G T A G C T G C A A C T G A C G T C T A G A C T G A C G T G T C A G A T C A G T C C G T A A G T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCAGTGGTANCAC-----
-NNNNGGTACCCCCCANN
 A C T G T A G C T G C A A C T G A C G T C T A G A C T G A C G T G T C A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCAGTGGTANCAC
TTRAGTGSYK----
 A C G T A C T G T A G C T G C A A C T G A C G T C T A G A C T G A C G T G T C A G A T C A G T C C G T A A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T