Information for 6-GAAGRGSKCKCCG (Motif 12)

A C T G G T C A C G T A A C T G C T A G A C T G A T C G C A G T A G T C A C T G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G G T A C A C T G G T C A A T G C A G T C A G T C A G T C A C G T A C G T A G T C
p-value:1e-11
log p-value:-2.552e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.8 +/- 20.5bp
Average Position of motif in Background46.0 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAAGRGSKCKCCG
NGAAGC--------
 A C G T A C T G G T C A C G T A A C T G C T A G A C T G A T C G C A G T A G T C A C T G A G T C A G T C A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAAGRGSKCKCCG-
ATAAGGGCGCGCGAT
 A C G T A C T G G T C A C G T A A C T G C T A G A C T G A T C G C A G T A G T C A C T G A G T C A G T C A C T G A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAAGRGSKCKCCG---
-AAGGKGRCGCAGGCA
 A C T G G T C A C G T A A C T G C T A G A C T G A T C G C A G T A G T C A C T G A G T C A G T C A C T G A C G T A C G T A C G T
A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GAAGRGSKCKCCG---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A A C T G C T A G A C T G A T C G C A G T A G T C A C T G A G T C A G T C A C T G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAAGRGSKCKCCG-
ATAAAGGCGCGCGAT
 A C G T A C T G G T C A C G T A A C T G C T A G A C T G A T C G C A G T A G T C A C T G A G T C A G T C A C T G A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GAAGRGSKCKCCG
-------GCTCCG
 A C T G G T C A C G T A A C T G C T A G A C T G A T C G C A G T A G T C A C T G A G T C A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAAGRGSKCKCCG--
TTGGGGGCGCCCCTAG
 A C G T A C T G G T C A C G T A A C T G C T A G A C T G A T C G C A G T A G T C A C T G A G T C A G T C A C T G A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAAGRGSKCKCCG
GGAGAAAGGTGCGA--
 A C G T A C G T A C G T A C T G G T C A C G T A A C T G C T A G A C T G A T C G C A G T A G T C A C T G A G T C A G T C A C T G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GAAGRGSKCKCCG
----AGCGCGCC-
 A C T G G T C A C G T A A C T G C T A G A C T G A T C G C A G T A G T C A C T G A G T C A G T C A C T G
A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAAGRGSKCKCCG
-NRRGGGTCTT--
 A C T G G T C A C G T A A C T G C T A G A C T G A T C G C A G T A G T C A C T G A G T C A G T C A C T G
A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T