Information for 1-GAAWGCAGGCCCC (Motif 3)

C T A G C T G A C G T A G C T A C T A G T A G C C T G A A C T G A T C G G T A C G T A C A G T C A G T C
Reverse Opposite:
T C A G C T A G C A T G A C T G A T G C A G T C A G C T A T C G A G T C C G A T A C G T A G C T A G T C
p-value:1e-13
log p-value:-3.078e+01
Information Content per bp:1.830
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 24.5bp
Average Position of motif in Background66.0 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GAAWGCAGGCCCC------
-----CAGGCCNNGGCCNN
 C T A G C T G A C G T A G C T A C T A G T A G C C T G A A C T G A T C G G T A C G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GAAWGCAGGCCCC
----CNAGGCCT-
 C T A G C T G A C G T A G C T A C T A G T A G C C T G A A C T G A T C G G T A C G T A C A G T C A G T C
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GAAWGCAGGCCCC
----CTAGGCCT-
 C T A G C T G A C G T A G C T A C T A G T A G C C T G A A C T G A T C G G T A C G T A C A G T C A G T C
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GAAWGCAGGCCCC-
----GTGGGCCCCA
 C T A G C T G A C G T A G C T A C T A G T A G C C T G A A C T G A T C G G T A C G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

TEAD1/MA0090.2/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GAAWGCAGGCCCC
NTGGAATGTG------
 A C G T A C G T A C G T C T A G C T G A C G T A G C T A C T A G T A G C C T G A A C T G A T C G G T A C G T A C A G T C A G T C
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GAAWGCAGGCCCC
ACTATGAATGAATGAT--
 A C G T A C G T A C G T A C G T A C G T C T A G C T G A C G T A G C T A C T A G T A G C C T G A A C T G A T C G G T A C G T A C A G T C A G T C
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GAAWGCAGGCCCC
AAGGKGRCGCAGGCA--
 A C G T A C G T A C G T A C G T C T A G C T G A C G T A G C T A C T A G T A G C C T G A A C T G A T C G G T A C G T A C A G T C A G T C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GAAWGCAGGCCCC
ACTGAAACCA------
 A C G T A C G T A C G T C T A G C T G A C G T A G C T A C T A G T A G C C T G A A C T G A T C G G T A C G T A C A G T C A G T C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:9
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------GAAWGCAGGCCCC
NNNNGGGGGAAGANGG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T G A C G T A G C T A C T A G T A G C C T G A A C T G A T C G G T A C G T A C A G T C A G T C
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GAAWGCAGGCCCC
NTGGAATGTN------
 A C G T A C G T A C G T C T A G C T G A C G T A G C T A C T A G T A G C C T G A A C T G A T C G G T A C G T A C A G T C A G T C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T