Information for 10-TGCGCCTGAC (Motif 21)

A C G T A C T G A G T C A C T G A T G C A G T C A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C T G A T C G A G T C A C T G A G T C C G T A
p-value:1e-6
log p-value:-1.557e+01
Information Content per bp:1.964
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.2 +/- 29.5bp
Average Position of motif in Background48.5 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGCGCCTGAC---
GGNGCGNCTGTTNNN
 A C G T A C G T A C G T A C T G A G T C A C T G A T G C A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Mitf/MA0620.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGCGCCTGAC-
-NCACGTGACN
 A C G T A C T G A G T C A C T G A T G C A G T C A C G T A C T G C G T A A G T C A C G T
A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

ID4/MA0824.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCGCCTGAC
TACACCTGTC
 A C G T A C T G A G T C A C T G A T G C A G T C A C G T A C T G C G T A A G T C
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGCGCCTGAC-
---NCGTGACN
 A C G T A C T G A G T C A C T G A T G C A G T C A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGCGCCTGAC---
---VGCTGWCAVB
 A C G T A C T G A G T C A C T G A T G C A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCGCCTGAC--
TGACCTTGACCT
 A C G T A C T G A G T C A C T G A T G C A G T C A C G T A C T G C G T A A G T C A C G T A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGCGCCTGAC--
-----TTGACAG
 A C G T A C T G A G T C A C T G A T G C A G T C A C G T A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGCGCCTGAC-----
--CNNTTGACCTTTG
 A C G T A C T G A G T C A C T G A T G C A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0147.1_Max_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGCGCCTGAC--
NNGTCGCGTGNCAC
 A C G T A C G T A C G T A C T G A G T C A C T G A T G C A G T C A C G T A C T G C G T A A G T C A C G T A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGCGCCTGAC
CGCACCTGCT
 A C G T A C T G A G T C A C T G A T G C A G T C A C G T A C T G C G T A A G T C
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T