Information for 2-GCCDCWGSCCCGVSTT (Motif 2)

C A T G G T A C G A T C C A G T T A G C G C T A A C T G A T G C A G T C A G T C T A G C A T C G T C A G T A G C G A C T A G C T
Reverse Opposite:
C T G A C G T A A T C G A G T C T A G C A T C G T C A G T A C G T A C G A G T C C G A T A T C G G T C A C A T G A C T G G A T C
p-value:1e-13
log p-value:-3.193e+01
Information Content per bp:1.638
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.1 +/- 18.3bp
Average Position of motif in Background66.9 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCDCWGSCCCGVSTT
AGCCTCAGGCA------
 A C G T C A T G G T A C G A T C C A G T T A G C G C T A A C T G A T G C A G T C A G T C T A G C A T C G T C A G T A G C G A C T A G C T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCDCWGSCCCGVSTT
NGCCTNAGGCN------
 A C G T C A T G G T A C G A T C C A G T T A G C G C T A A C T G A T G C A G T C A G T C T A G C A T C G T C A G T A G C G A C T A G C T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCDCWGSCCCGVSTT
CGCCTCAGGCA------
 A C G T C A T G G T A C G A T C C A G T T A G C G C T A A C T G A T G C A G T C A G T C T A G C A T C G T C A G T A G C G A C T A G C T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCDCWGSCCCGVSTT
ATTGCCTCAGGCAAT----
 A C G T A C G T A C G T C A T G G T A C G A T C C A G T T A G C G C T A A C T G A T G C A G T C A G T C T A G C A T C G T C A G T A G C G A C T A G C T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCCDCWGSCCCGVSTT
NTNGCCTCAGGCNNN----
 A C G T A C G T A C G T C A T G G T A C G A T C C A G T T A G C G C T A A C T G A T G C A G T C A G T C T A G C A T C G T C A G T A G C G A C T A G C T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCCDCWGSCCCGVSTT
GCCTCAGGGCAT----
 C A T G G T A C G A T C C A G T T A G C G C T A A C T G A T G C A G T C A G T C T A G C A T C G T C A G T A G C G A C T A G C T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCCDCWGSCCCGVSTT
SCCTSAGGSCAW----
 C A T G G T A C G A T C C A G T T A G C G C T A A C T G A T G C A G T C A G T C T A G C A T C G T C A G T A G C G A C T A G C T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCCDCWGSCCCGVSTT--
----CAGGCCNNGGCCNN
 C A T G G T A C G A T C C A G T T A G C G C T A A C T G A T G C A G T C A G T C T A G C A T C G T C A G T A G C G A C T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCDCWGSCCCGVSTT
NVCAGCTGBBNN-----
 A C G T C A T G G T A C G A T C C A G T T A G C G C T A A C T G A T G C A G T C A G T C T A G C A T C G T C A G T A G C G A C T A G C T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCCDCWGSCCCGVSTT
TCACCTCTGGGCAG----
 A C G T A C G T C A T G G T A C G A T C C A G T T A G C G C T A A C T G A T G C A G T C A G T C T A G C A T C G T C A G T A G C G A C T A G C T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T