Information for 7-CCGACGCGCG (Motif 14)

A G T C T G A C C T A G G T C A T G A C A C T G A T G C A C T G A G T C A T C G
Reverse Opposite:
A T G C A C T G A G T C A T C G A G T C A C T G C A G T A G T C A C T G A C T G
p-value:1e-9
log p-value:-2.212e+01
Information Content per bp:1.835
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif125.6
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets54.4 +/- 23.4bp
Average Position of motif in Background47.6 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0095.1_Zfp161_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCGACGCGCG-----
NCANGCGCGCGCGCCA
 A C G T A G T C T G A C C T A G G T C A T G A C A C T G A T G C A C T G A G T C A T C G A C G T A C G T A C G T A C G T A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCGACGCGCG-------
--NTCGCGCGCCTTNNN
 A G T C T G A C C T A G G T C A T G A C A C T G A T G C A C T G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCGACGCGCG
CCAGACRSVB-
 A C G T A G T C T G A C C T A G G T C A T G A C A C T G A T G C A C T G A G T C A T C G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCGACGCGCG-------
--ANCGCGCGCCCTTNN
 A G T C T G A C C T A G G T C A T G A C A C T G A T G C A C T G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCGACGCGCG
AGCAACAGCCGCACC
 A C G T A C G T A C G T A C G T A C G T A G T C T G A C C T A G G T C A T G A C A C T G A T G C A C T G A G T C A T C G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Hes1/MA1099.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCGACGCGCG--
--NNCGCGTGNN
 A G T C T G A C C T A G G T C A T G A C A C T G A T G C A C T G A G T C A T C G A C G T A C G T
A C G T A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCGACGCGCG
-NGAAGC---
 A G T C T G A C C T A G G T C A T G A C A C T G A T G C A C T G A G T C A T C G
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCGACGCGCG
CCGGAAGTGGC
 A C G T A G T C T G A C C T A G G T C A T G A C A C T G A T G C A C T G A G T C A T C G
T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

NRF(NRF)/Promoter/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCGACGCGCG-
GCGCATGCGCAC
 A C G T A G T C T G A C C T A G G T C A T G A C A C T G A T G C A C T G A G T C A T C G A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCGACGCGCG
--TACGTGCV
 A G T C T G A C C T A G G T C A T G A C A C T G A T G C A C T G A G T C A T C G
A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C