Information for 6-CGCGACCTTG (Motif 12)

T A G C A T C G A G T C A T C G C G T A A G T C A G T C C G A T A C G T A C T G
Reverse Opposite:
A G T C G T C A C G T A A C T G A C T G G C A T A T G C A C T G A T G C A T C G
p-value:1e-9
log p-value:-2.275e+01
Information Content per bp:1.860
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif37.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets60.7 +/- 19.3bp
Average Position of motif in Background55.9 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0014.1_Esrra_1/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CGCGACCTTG----
NNNNATGACCTTGANTN
 A C G T A C G T A C G T T A G C A T C G A G T C A T C G C G T A A G T C A G T C C G A T A C G T A C T G A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CGCGACCTTG
BNTGDCCTTG
 T A G C A T C G A G T C A T C G C G T A A G T C A G T C C G A T A C G T A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CGCGACCTTG--
--TGACCTTGAN
 T A G C A T C G A G T C A T C G C G T A A G T C A G T C C G A T A C G T A C T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CGCGACCTTG--
--TGACCTTGAV
 T A G C A T C G A G T C A T C G C G T A A G T C A G T C C G A T A C G T A C T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CGCGACCTTG-
-NTGACCTTGA
 T A G C A T C G A G T C A T C G C G T A A G T C A G T C C G A T A C G T A C T G A C G T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CGCGACCTTG-
-ATGACCTTGA
 T A G C A T C G A G T C A T C G C G T A A G T C A G T C C G A T A C G T A C T G A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGCGACCTTG-----
GCTGACCTTGAACTN
 T A G C A T C G A G T C A T C G C G T A A G T C A G T C C G A T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CGCGACCTTG-
NATGACCTTGA
 T A G C A T C G A G T C A T C G C G T A A G T C A G T C C G A T A C G T A C T G A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Esrra/MA0592.2/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGCGACCTTG--
-ATGACCTTGAA
 T A G C A T C G A G T C A T C G C G T A A G T C A G T C C G A T A C G T A C T G A C G T A C G T
A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGCGACCTTG
-GTGACCTT-
 T A G C A T C G A G T C A T C G C G T A A G T C A G T C C G A T A C G T A C T G
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T