Information for 12-GCGGTGAAGG (Motif 20)

A C T G A G T C C A T G A C T G G A C T A C T G T C G A C T G A A C T G C T A G
Reverse Opposite:
A G T C A G T C A G C T A G C T A G T C C T G A A G T C G T A C C T A G T G A C
p-value:1e-6
log p-value:-1.383e+01
Information Content per bp:1.846
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif209.6
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets49.6 +/- 26.2bp
Average Position of motif in Background45.8 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCGGTGAAGG---
-TGGGGAAGGGCM
 A C T G A G T C C A T G A C T G G A C T A C T G T C G A C T G A A C T G C T A G A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCGGTGAAGG---
-AGGTCAAGGTCA
 A C T G A G T C C A T G A C T G G A C T A C T G T C G A C T G A A C T G C T A G A C G T A C G T A C G T
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GCGGTGAAGG
----NGAAGC
 A C T G A G T C C A T G A C T G G A C T A C T G T C G A C T G A A C T G C T A G
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCGGTGAAGG---
-AGGTCAAGGTCA
 A C T G A G T C C A T G A C T G G A C T A C T G T C G A C T G A A C T G C T A G A C G T A C G T A C G T
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

TBX20/MA0689.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCGGTGAAGG
TAGGTGTGAAG-
 A C G T A C G T A C T G A G T C C A T G A C T G G A C T A C T G T C G A C T G A A C T G C T A G
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCGGTGAAGG
---GTGGAT-
 A C T G A G T C C A T G A C T G G A C T A C T G T C G A C T G A A C T G C T A G
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCGGTGAAGG---
GGCGGGGGCGGGGG
 A C G T A C T G A G T C C A T G A C T G G A C T A C T G T C G A C T G A A C T G C T A G A C G T A C G T A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCGGTGAAGG--
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C A T G A C T G G A C T A C T G T C G A C T G A A C T G C T A G A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCGGTGAAGG----
----TCAAGGTCAT
 A C T G A G T C C A T G A C T G G A C T A C T G T C G A C T G A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTGAAGG
TTGCGGTTT---
 A C G T A C G T A C T G A G T C C A T G A C T G G A C T A C T G T C G A C T G A A C T G C T A G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T