Information for 10-TGTGCTWAAA (Motif 14)

A G C T A C T G C G A T C A T G G T A C A C G T C G T A G T C A C G T A T G C A
Reverse Opposite:
A C G T C G A T C A G T G C A T C G T A A C T G G T A C C G T A A G T C C T G A
p-value:1e-7
log p-value:-1.751e+01
Information Content per bp:1.751
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif277.7
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets63.0 +/- 28.5bp
Average Position of motif in Background48.9 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCTWAAA
NNNNTTGTGTGCTTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G A T C A T G G T A C A C G T C G T A G T C A C G T A T G C A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGTGCTWAAA
GCTGTGGTTT--
 A C G T A C G T A G C T A C T G C G A T C A T G G T A C A C G T C G T A G T C A C G T A T G C A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCTWAAA
CTGTTCCTGG-
 A C G T A G C T A C T G C G A T C A T G G T A C A C G T C G T A G T C A C G T A T G C A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGTGCTWAAA
TAATTGTTCTAAAC
 A C G T A C G T A C G T A C G T A G C T A C T G C G A T C A T G G T A C A C G T C G T A G T C A C G T A T G C A
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TGTGCTWAAA--
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G A T C A T G G T A C A C G T C G T A G T C A C G T A T G C A A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGTGCTWAAA
NNHTGTGGTTWN-
 A C G T A C G T A C G T A G C T A C T G C G A T C A T G G T A C A C G T C G T A G T C A C G T A T G C A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TGTGCTWAAA--
TACTAAGTACTTAAATG
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G A T C A T G G T A C A C G T C G T A G T C A C G T A T G C A A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PB0090.1_Zbtb12_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGTGCTWAAA---
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T A G C T A C T G C G A T C A T G G T A C A C G T C G T A G T C A C G T A T G C A A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCTWAAA
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G A T C A T G G T A C A C G T C G T A G T C A C G T A T G C A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCTWAAA
AANTTATTGTTCTNNA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G A T C A T G G T A C A C G T C G T A G T C A C G T A T G C A
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A A C G T