Information for 3-GGTAACACCAKCNGST (Motif 10)

A C T G A C T G G A C T C T G A G T C A A G T C C G T A A T G C A G T C C G T A A C G T G A T C A T C G C T A G A T C G A C G T
Reverse Opposite:
C G T A A T G C A G T C A T G C C A T G T G C A A C G T A C T G T A C G C G A T A C T G A C G T A G C T C G T A A G T C A G T C
p-value:1e-8
log p-value:-1.951e+01
Information Content per bp:1.751
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 14.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGTAACACCAKCNGST
----CGACCATCTGTT
 A C T G A C T G G A C T C T G A G T C A A G T C C G T A A T G C A G T C C G T A A C G T G A T C A T C G C T A G A T C G A C G T
A C G T A C G T A C G T A C G T G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T

Spz1/MA0111.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGTAACACCAKCNGST
AGGGTAACAGC-------
 A C G T A C G T A C T G A C T G G A C T C T G A G T C A A G T C C G T A A T G C A G T C C G T A A C G T G A T C A T C G C T A G A T C G A C G T
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGTAACACCAKCNGST
ADGGYAGYAGCATCT---
 A C G T A C G T A C T G A C T G G A C T C T G A G T C A A G T C C G T A A T G C A G T C C G T A A C G T G A T C A T C G C T A G A T C G A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GGTAACACCAKCNGST--
------GCCAGCTGBTNB
 A C T G A C T G G A C T C T G A G T C A A G T C C G T A A T G C A G T C C G T A A C G T G A T C A T C G C T A G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGTAACACCAKCNGST
AGGAAACAGCTG-----
 A C G T A C T G A C T G G A C T C T G A G T C A A G T C C G T A A T G C A G T C C G T A A C G T G A T C A T C G C T A G A T C G A C G T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GGTAACACCAKCNGST
------ACCATCTGTT
 A C T G A C T G G A C T C T G A G T C A A G T C C G T A A T G C A G T C C G T A A C G T G A T C A T C G C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGTAACACCAKCNGST
GGAAANCCCC------
 A C T G A C T G G A C T C T G A G T C A A G T C C G T A A T G C A G T C C G T A A C G T G A T C A T C G C T A G A T C G A C G T
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGTAACACCAKCNGST
GGAAATTCCC------
 A C T G A C T G G A C T C T G A G T C A A G T C C G T A A T G C A G T C C G T A A C G T G A T C A T C G C T A G A T C G A C G T
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GGTAACACCAKCNGST
------AACAKATGGY
 A C T G A C T G G A C T C T G A G T C A A G T C C G T A A T G C A G T C C G T A A C G T G A T C A T C G C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GGTAACACCAKCNGST
------GCCATCTGTT
 A C T G A C T G G A C T C T G A G T C A A G T C C G T A A T G C A G T C C G T A A C G T G A T C A T C G C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T