p-value: | 1e-7 |
log p-value: | -1.789e+01 |
Information Content per bp: | 1.924 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 0.83% |
Number of Background Sequences with motif | 21.1 |
Percentage of Background Sequences with motif | 0.04% |
Average Position of motif in Targets | 40.1 +/- 21.0bp |
Average Position of motif in Background | 45.7 +/- 35.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0173.1_Sox21_2/Jaspar
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GGGACAATCG--- NNNNNGAACAATTGANN |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGGACAATCG- -RAACAATGGN |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGGACAATCG- -GAACAATGGN |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGGACAATCG---- AATGAACAATGGAATT |
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Sox17/MA0078.1/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGGACAATCG- --GACAATGNN |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGGACAATCG RNAACAATGG |
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SOX9/MA0077.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGGACAATCG -GAACAATGG |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGGACAATCG VRAACAATGG |
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PB0183.1_Sry_2/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GGGACAATCG--- TCACGGAACAATAGGTG |
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Sox6/MA0515.1/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGGACAATCG AAAACAATGG |
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