p-value: | 1e-8 |
log p-value: | -1.938e+01 |
Information Content per bp: | 1.870 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.62% |
Number of Background Sequences with motif | 6.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 55.8 +/- 17.7bp |
Average Position of motif in Background | 54.4 +/- 18.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GTCTGMSKSTCGC VBSYGTCTGG------- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTCTGMSKSTCGC CTGTCTGG------- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTCTGMSKSTCGC TWGTCTGV------- |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTCTGMSKSTCGC TGTCTGDCACCT-- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------GTCTGMSKSTCGC NNTNNTGTCTGGNNTNG-- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 6 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTCTGMSKSTCGC CTGTCTGTCACCT-- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 7 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTCTGMSKSTCGC GGTCTGGCAT---- |
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POL002.1_INR/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTCTGMSKSTCGC NNNANTGA------- |
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ZBTB33/MA0527.1/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GTCTGMSKSTCGC-------- ------CTCTCGCGAGATCTG |
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ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer
Match Rank: | 10 |
Score: | 0.50 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GTCTGMSKSTCGC------ ----GGNTCTCGCGAGAAC |
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