Information for 9-GSMAMCTGCAGGT (Motif 9)

A C T G A T C G G T A C C G T A G T C A A G T C A C G T C T A G T A G C C G T A A C T G A C T G A G C T
Reverse Opposite:
C T G A A G T C A G T C A C G T A T C G A G T C C G T A A C T G A C G T A C G T C A T G A T G C A G T C
p-value:1e-12
log p-value:-2.904e+01
Information Content per bp:1.884
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif27.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets29.7 +/- 14.8bp
Average Position of motif in Background51.0 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GSMAMCTGCAGGT
SNGCACCTGCHS--
 A C G T A C T G A T C G G T A C C G T A G T C A A G T C A C G T C T A G T A G C C G T A A C T G A C T G A G C T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GSMAMCTGCAGGT--
------AACAGGTGT
 A C T G A T C G G T A C C G T A G T C A A G T C A C G T C T A G T A G C C G T A A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GSMAMCTGCAGGT---
------NNCAGGTGNN
 A C T G A T C G G T A C C G T A G T C A A G T C A C G T C T A G T A G C C G T A A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.62
Offset:7
Orientation:forward strand
Alignment:GSMAMCTGCAGGT----
-------VCAGGTRDRY
 A C T G A T C G G T A C C G T A G T C A A G T C A C G T C T A G T A G C C G T A A C T G A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GSMAMCTGCAGGT---
------NNCAGGTGTN
 A C T G A T C G G T A C C G T A G T C A A G T C A C G T C T A G T A G C C G T A A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GSMAMCTGCAGGT
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G G T A C C G T A G T C A A G T C A C G T C T A G T A G C C G T A A C T G A C T G A G C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GSMAMCTGCAGGT---
------NNCAGGTGCG
 A C T G A T C G G T A C C G T A G T C A A G T C A C G T C T A G T A G C C G T A A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GSMAMCTGCAGGT--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A T C G G T A C C G T A G T C A A G T C A C G T C T A G T A G C C G T A A C T G A C T G A G C T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GSMAMCTGCAGGT---
------GACAGGTGTN
 A C T G A T C G G T A C C G T A G T C A A G T C A C G T C T A G T A G C C G T A A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GSMAMCTGCAGGT--
---CACAGCAGGGGG
 A C T G A T C G G T A C C G T A G T C A A G T C A C G T C T A G T A G C C G T A A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G