Information for 10-AGGCGCAGTCACY (Motif 11)

G T C A A C T G A C T G A G T C A T C G A G T C C G T A A C T G G A C T A T G C C G T A A T G C A G T C
Reverse Opposite:
T C A G A T C G A C G T A T C G C G T A A G T C A C G T A C T G A T G C C T A G A G T C A G T C A C G T
p-value:1e-10
log p-value:-2.485e+01
Information Content per bp:1.836
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 23.8bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGCGCAGTCACY
-TGCCCAGNHW--
 G T C A A C T G A C T G A G T C A T C G A G T C C G T A A C T G G A C T A T G C C G T A A T G C A G T C
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGGCGCAGTCACY
----CCAGACAG-
 G T C A A C T G A C T G A G T C A T C G A G T C C G T A A C T G G A C T A T G C C G T A A T G C A G T C
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGGCGCAGTCACY-
----CCAGACRSVB
 G T C A A C T G A C T G A G T C A T C G A G T C C G T A A C T G G A C T A T G C C G T A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGGCGCAGTCACY
CAGGCCNNGGCCNN
 A C G T G T C A A C T G A C T G A G T C A T C G A G T C C G T A A C T G G A C T A T G C C G T A A T G C A G T C
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGGCGCAGTCACY
AAGGKGRCGCAGGCA--
 A C G T A C G T A C G T A C G T G T C A A C T G A C T G A G T C A T C G A G T C C G T A A C T G G A C T A T G C C G T A A T G C A G T C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGGCGCAGTCACY
----BCAGACWA-
 G T C A A C T G A C T G A G T C A T C G A G T C C G T A A C T G G A C T A T G C C G T A A T G C A G T C
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGCGCAGTCACY
-TGCGCAGGCGC-
 G T C A A C T G A C T G A G T C A T C G A G T C C G T A A C T G G A C T A T G C C G T A A T G C A G T C
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGCGCAGTCACY
AGGCCTAG-----
 G T C A A C T G A C T G A G T C A T C G A G T C C G T A A C T G G A C T A T G C C G T A A T G C A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGGCGCAGTCACY
CCAGGAACAG-----
 A C G T A C G T G T C A A C T G A C T G A G T C A T C G A G T C C G T A A C T G G A C T A T G C C G T A A T G C A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGGCGCAGTCACY-----
YCAGGCWCAGTACCAGGCTC
 A C G T A C G T G T C A A C T G A C T G A G T C A T C G A G T C C G T A A C T G G A C T A T G C C G T A A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C