Information for 5-CCGCGGCAGGTGTCAG (Motif 13)

A G T C A T G C A C T G A G T C A T C G A C T G A T G C C G T A A C T G A C T G A C G T A C T G A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G C G T A G T A C C G T A A G T C A G T C A C G T A T C G A G T C A T G C A C T G G T A C A T C G A C T G
p-value:1e-8
log p-value:-1.951e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.0 +/- 20.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.67
Offset:7
Orientation:forward strand
Alignment:CCGCGGCAGGTGTCAG
-------AGGTGTCA-
 A G T C A T G C A C T G A G T C A T C G A C T G A T G C C G T A A C T G A C T G A C G T A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CCGCGGCAGGTGTCAG
---SDGCAGGTGCNS-
 A G T C A T G C A C T G A G T C A T C G A C T G A T G C C G T A A C T G A C T G A C G T A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

ID4/MA0824.1/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CCGCGGCAGGTGTCAG
----GACAGGTGTN--
 A G T C A T G C A C T G A G T C A T C G A C T G A T G C C G T A A C T G A C T G A C G T A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CCGCGGCAGGTGTCAG
----AACAGGTGT---
 A G T C A T G C A C T G A G T C A T C G A C T G A T G C C G T A A C T G A C T G A C G T A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CCGCGGCAGGTGTCAG
----NNCAGGTGNN--
 A G T C A T G C A C T G A G T C A T C G A C T G A T G C C G T A A C T G A C T G A C G T A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCGCGGCAGGTGTCAG----
---TNNNNGGTGTCATNTNT
 A G T C A T G C A C T G A G T C A T C G A C T G A T G C C G T A A C T G A C T G A C G T A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.62
Offset:7
Orientation:forward strand
Alignment:CCGCGGCAGGTGTCAG
-------AGGTGTGA-
 A G T C A T G C A C T G A G T C A T C G A C T G A T G C C G T A A C T G A C T G A C G T A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.62
Offset:7
Orientation:forward strand
Alignment:CCGCGGCAGGTGTCAG
-------AGGTGTGA-
 A G T C A T G C A C T G A G T C A T C G A C T G A T G C C G T A A C T G A C T G A C G T A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCGCGGCAGGTGTCAG
---TGACAGGTGTCA-
 A G T C A T G C A C T G A G T C A T C G A C T G A T G C C G T A A C T G A C T G A C G T A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCGCGGCAGGTGTCAG---
---GCGGAGGTGTCGCCTC
 A G T C A T G C A C T G A G T C A T C G A C T G A T G C C G T A A C T G A C T G A C G T A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C