Information for 6-TTTGAAAAGCCCA (Motif 9)

A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A G T C G T A C A T G C C G T A
Reverse Opposite:
A C G T A T C G A C T G A C T G A G T C A C G T A C G T A C G T A C G T G T A C C G T A C G T A C G T A
p-value:1e-9
log p-value:-2.126e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.7 +/- 17.1bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTGAAAAGCCCA
TTTGAAACCG---
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A G T C G T A C A T G C C G T A
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTTGAAAAGCCCA----
-GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A G T C G T A C A T G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTGAAAAGCCCA
ATTTGAATT-----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A G T C G T A C A T G C C G T A
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTTGAAAAGCCCA
---GGAAANCCCC
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A G T C G T A C A T G C C G T A
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTTGAAAAGCCCA
--GGAAATCCCC-
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A G T C G T A C A T G C C G T A
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTTGAAAAGCCCA
-TGGAAAA-----
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A G T C G T A C A T G C C G T A
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTTGAAAAGCCCA
-ANGNAAAGGTCA
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A G T C G T A C A T G C C G T A
A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTTGAAAAGCCCA
NATGGAAAAN----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A G T C G T A C A T G C C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTTGAAAAGCCCA
NTTTTACGAGN---
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A G T C G T A C A T G C C G T A
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TTTGAAAAGCCCA-
--GGGAAATCCCCN
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A G T C G T A C A T G C C G T A A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T