Information for 5-TGGAACCTCTCTG (Motif 7)

A C G T A C T G A T C G C G T A C T G A T G A C A T G C A C G T A G T C A C G T A G T C C A G T A C T G
Reverse Opposite:
G T A C G T C A A C T G T C G A A C T G G T C A A T C G A C T G G A C T A C G T A T G C A G T C C G T A
p-value:1e-10
log p-value:-2.442e+01
Information Content per bp:1.787
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif30.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets58.7 +/- 24.5bp
Average Position of motif in Background50.5 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGGAACCTCTCTG
-GGAAATTCCC--
 A C G T A C T G A T C G C G T A C T G A T G A C A T G C A C G T A G T C A C G T A G T C C A G T A C T G
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGGAACCTCTCTG
-GGAAATTCCC--
 A C G T A C T G A T C G C G T A C T G A T G A C A T G C A C G T A G T C A C G T A G T C C A G T A C T G
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGGAACCTCTCTG-
---AGCCACTCAAG
 A C G T A C T G A T C G C G T A C T G A T G A C A T G C A C G T A G T C A C G T A G T C C A G T A C T G A C G T
A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TGGAACCTCTCTG----
--ACCACTCTCGGTCAC
 A C G T A C T G A T C G C G T A C T G A T G A C A T G C A C G T A G T C A C G T A G T C C A G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGGAACCTCTCTG
NNTGGAAANN-----
 A C G T A C G T A C G T A C T G A T C G C G T A C T G A T G A C A T G C A C G T A G T C A C G T A G T C C A G T A C T G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGGAACCTCTCTG
-GGAAATCCCC--
 A C G T A C T G A T C G C G T A C T G A T G A C A T G C A C G T A G T C A C G T A G T C C A G T A C T G
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGGAACCTCTCTG
-GGAAANCCCC--
 A C G T A C T G A T C G C G T A C T G A T G A C A T G C A C G T A G T C A C G T A G T C C A G T A C T G
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGGAACCTCTCTG
GGGAAATCCCCN-
 A C G T A C T G A T C G C G T A C T G A T G A C A T G C A C G T A G T C A C G T A G T C C A G T A C T G
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGGAACCTCTCTG
CGGAGC-------
 A C G T A C T G A T C G C G T A C T G A T G A C A T G C A C G T A G T C A C G T A G T C C A G T A C T G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TGGAACCTCTCTG
---AASCACTCAA
 A C G T A C T G A T C G C G T A C T G A T G A C A T G C A C G T A G T C A C G T A G T C C A G T A C T G
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A