Information for 5-ACAAAAGGGACAG (Motif 7)

C G T A A G T C G T C A T C G A G T C A C G T A A C T G A C T G T A C G G T C A G A T C G T C A A T C G
Reverse Opposite:
A T G C A C G T C A T G A C G T A T G C G T A C A G T C A C G T A C G T A G C T A C G T A C T G C G A T
p-value:1e-12
log p-value:-2.856e+01
Information Content per bp:1.799
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif26.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets48.8 +/- 24.2bp
Average Position of motif in Background46.8 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ACAAAAGGGACAG
---CCAGGAACAG
 C G T A A G T C G T C A T C G A G T C A C G T A A C T G A C T G T A C G G T C A G A T C G T C A A T C G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAAGGGACAG
RACAAWGG------
 A C G T C G T A A G T C G T C A T C G A G T C A C G T A A C T G A C T G T A C G G T C A G A T C G T C A A T C G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACAAAAGGGACAG---
-AGAAAGTGAAAGTGA
 C G T A A G T C G T C A T C G A G T C A C G T A A C T G A C T G T A C G G T C A G A T C G T C A A T C G A C G T A C G T A C G T
A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAAGGGACAG
AAAACAAAGG------
 A C G T A C G T A C G T C G T A A G T C G T C A T C G A G T C A C G T A A C T G A C T G T A C G G T C A G A T C G T C A A T C G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACAAAAGGGACAG-
--GAAAGTGAAAGT
 C G T A A G T C G T C A T C G A G T C A C G T A A C T G A C T G T A C G G T C A G A T C G T C A A T C G A C G T
A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAAGGGACAG
RNAACAATGG------
 A C G T A C G T A C G T C G T A A G T C G T C A T C G A G T C A C G T A A C T G A C T G T A C G G T C A G A T C G T C A A T C G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----ACAAAAGGGACAG
NNTNNACAATGGGANNN-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C G T C A T C G A G T C A C G T A A C T G A C T G T A C G G T C A G A T C G T C A A T C G
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACAAAAGGGACAG
GAACAATGGN-----
 A C G T A C G T C G T A A G T C G T C A T C G A G T C A C G T A A C T G A C T G T A C G G T C A G A T C G T C A A T C G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACAAAAGGGACAG-
ACGAAAGCGAAAGT
 C G T A A G T C G T C A T C G A G T C A C G T A A C T G A C T G T A C G G T C A G A T C G T C A A T C G A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAAGGGACAG
AACAAAGG------
 A C G T C G T A A G T C G T C A T C G A G T C A C G T A A C T G A C T G T A C G G T C A G A T C G T C A A T C G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T