Information for 3-CACCTGTCAG (Motif 6)

A T G C C G T A A G T C G T A C A C G T C T A G C A G T T G A C C G T A A T C G
Reverse Opposite:
A T G C C G A T A C T G G T C A A G T C C G T A A C T G C T A G C G A T A T C G
p-value:1e-12
log p-value:-2.870e+01
Information Content per bp:1.839
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.64%
Number of Background Sequences with motif127.1
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets51.8 +/- 23.6bp
Average Position of motif in Background49.5 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ID4/MA0824.1/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CACCTGTCAG
TACACCTGTC--
 A C G T A C G T A T G C C G T A A G T C G T A C A C G T C T A G C A G T T G A C C G T A A T C G
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CACCTGTCAG
NCACCTGTN--
 A C G T A T G C C G T A A G T C G T A C A C G T C T A G C A G T T G A C C G T A A T C G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CACCTGTCAG
NNCACCTGNN--
 A C G T A C G T A T G C C G T A A G T C G T A C A C G T C T A G C A G T T G A C C G T A A T C G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CACCTGTCAG
CGCACCTGCT--
 A C G T A C G T A T G C C G T A A G T C G T A C A C G T C T A G C A G T T G A C C G T A A T C G
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:5
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CACCTGTCAG
ACCACCTGTT--
 A C G T A C G T A T G C C G T A A G T C G T A C A C G T C T A G C A G T T G A C C G T A A T C G
G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CACCTGTCAG
AACACCTGCT--
 A C G T A C G T A T G C C G T A A G T C G T A C A C G T C T A G C A G T T G A C C G T A A T C G
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:7
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---CACCTGTCAG
TGACACCTGTCA-
 A C G T A C G T A C G T A T G C C G T A A G T C G T A C A C G T C T A G C A G T T G A C C G T A A T C G
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CACCTGTCAG
RYHYACCTGB---
 A C G T A C G T A C G T A T G C C G T A A G T C G T A C A C G T C T A G C A G T T G A C C G T A A T C G
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:9
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CACCTGTCAG
TGACACCTGTCA-
 A C G T A C G T A C G T A T G C C G T A A G T C G T A C A C G T C T A G C A G T T G A C C G T A A T C G
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:10
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---CACCTGTCAG
CCTCACCTG----
 A C G T A C G T A C G T A T G C C G T A A G T C G T A C A C G T C T A G C A G T T G A C C G T A A T C G
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T