Information for 4-CTGGGCWGMACCT (Motif 5)

A G T C A C G T A C T G A C T G A C T G A G T C C G T A C T A G T G C A C G T A G T A C T G A C A C G T
Reverse Opposite:
G T C A A C T G C A T G A C G T A C G T A G T C C G A T A C T G A G T C A G T C A G T C T C G A C T A G
p-value:1e-12
log p-value:-2.871e+01
Information Content per bp:1.787
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif42.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets42.1 +/- 22.6bp
Average Position of motif in Background49.7 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---CTGGGCWGMACCT
WDNCTGGGCA------
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A G T C C G T A C T A G T G C A C G T A G T A C T G A C A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTGGGCWGMACCT
--GGGCGGGACC-
 A G T C A C G T A C T G A C T G A C T G A G T C C G T A C T A G T G C A C G T A G T A C T G A C A C G T
A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGCWGMACCT
TNNGGGCAG-----
 A C G T A G T C A C G T A C T G A C T G A C T G A G T C C G T A C T A G T G C A C G T A G T A C T G A C A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTGGGCWGMACCT
NNNNTTGGGCACNNCN-
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A G T C C G T A C T A G T G C A C G T A G T A C T G A C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGCWGMACCT
NGTGGGCAT-----
 A C G T A G T C A C G T A C T G A C T G A C T G A G T C C G T A C T A G T G C A C G T A G T A C T G A C A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGGGCWGMACCT
BTKGGCGGGAAA-
 A G T C A C G T A C T G A C T G A C T G A G T C C G T A C T A G T G C A C G T A G T A C T G A C A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CTGGGCWGMACCT
TCACCTCTGGGCAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A G T C C G T A C T A G T G C A C G T A G T A C T G A C A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTGGGCWGMACCT
--GGGCGGGAAGG
 A G T C A C G T A C T G A C T G A C T G A G T C C G T A C T A G T G C A C G T A G T A C T G A C A C G T
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGCWGMACCT------
NNNGGGHAGCAHRTGCTRCC
 A C G T A G T C A C G T A C T G A C T G A C T G A G T C C G T A C T A G T G C A C G T A G T A C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTGGGCWGMACCT
---GGCGGGAAAH
 A G T C A C G T A C T G A C T G A C T G A G T C C G T A C T A G T G C A C G T A G T A C T G A C A C G T
A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T