Information for 3-GGAGTGGATGRGTGAG (Motif 3)

A C T G A C T G C G T A A C T G A C G T A T C G A C T G C G T A G A C T A C T G T C A G A C T G C G A T A C T G C G T A A T C G
Reverse Opposite:
A T G C C G A T G T A C C G T A G T A C A G T C G T A C C T G A C G A T A G T C A T G C C G T A G T A C C G A T A G T C G T A C
p-value:1e-15
log p-value:-3.605e+01
Information Content per bp:1.744
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 20.5bp
Average Position of motif in Background54.3 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGAGTGGATGRGTGAG
---GTGGAT-------
 A C T G A C T G C G T A A C T G A C G T A T C G A C T G C G T A G A C T A C T G T C A G A C T G C G A T A C T G C G T A A T C G
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAGTGGATGRGTGAG
TGATTGGCTANN----
 A C T G A C T G C G T A A C T G A C G T A T C G A C T G C G T A G A C T A C T G T C A G A C T G C G A T A C T G C G T A A T C G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGAGTGGATGRGTGAG
CTTGAGTGGCT-------
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A T C G A C T G C G T A G A C T A C T G T C A G A C T G C G A T A C T G C G T A A T C G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTGGATGRGTGAG
CTGATTGGTCNATTT--
 A C G T A C T G A C T G C G T A A C T G A C G T A T C G A C T G C G T A G A C T A C T G T C A G A C T G C G A T A C T G C G T A A T C G
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGAGTGGATGRGTGAG
TTRAGTGSYK-------
 A C G T A C T G A C T G C G T A A C T G A C G T A T C G A C T G C G T A G A C T A C T G T C A G A C T G C G A T A C T G C G T A A T C G
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGAGTGGATGRGTGAG
TGCGTGGGYG------
 A C T G A C T G C G T A A C T G A C G T A T C G A C T G C G T A G A C T A C T G T C A G A C T G C G A T A C T G C G T A A T C G
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGAGTGGATGRGTGAG
NGCGTGGGCGGR----
 A C T G A C T G C G T A A C T G A C G T A T C G A C T G C G T A G A C T A C T G T C A G A C T G C G A T A C T G C G T A A T C G
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTGGATGRGTGAG
TTGAGTGSTT-------
 A C G T A C T G A C T G C G T A A C T G A C G T A T C G A C T G C G T A G A C T A C T G T C A G A C T G C G A T A C T G C G T A A T C G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTGGATGRGTGAG
TTGATTGN---------
 A C G T A C T G A C T G C G T A A C T G A C G T A T C G A C T G C G T A G A C T A C T G T C A G A C T G C G A T A C T G C G T A A T C G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:10
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------GGAGTGGATGRGTGAG
AGAGTGCTGATTGGTCCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A T C G A C T G C G T A G A C T A C T G T C A G A C T G C G A T A C T G C G T A A T C G
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T A C G T A C G T A C G T A C G T