Information for 15-CAGGCAGTCATGC (Motif 24)

A G T C C G T A A C T G A C T G A G T C C G T A A C T G A G C T A G T C G T C A A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C C G T A A C G T A C T G C T G A A G T C A C G T A C T G A G T C A G T C A C G T A C T G
p-value:1e-7
log p-value:-1.615e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.2 +/- 37.2bp
Average Position of motif in Background71.6 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCAGTCATGC-
SCAGYCADGCATGAC
 A C G T A G T C C G T A A C T G A C T G A G T C C G T A A C T G A G C T A G T C G T C A A C G T A C T G A T G C A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGGCAGTCATGC
ACAGGAAGTG----
 A C G T A G T C C G T A A C T G A C T G A G T C C G T A A C T G A G C T A G T C G T C A A C G T A C T G A T G C
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGGCAGTCATGC
AACAGGAAGT-----
 A C G T A C G T A G T C C G T A A C T G A C T G A G T C C G T A A C T G A G C T A G T C G T C A A C G T A C T G A T G C
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGGCAGTCATGC--
GCAGCCAAGCGTGACN
 A C G T A G T C C G T A A C T G A C T G A G T C C G T A A C T G A G C T A G T C G T C A A C G T A C T G A T G C A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGGCAGTCATGC
ANCAGGAAGT-----
 A C G T A C G T A G T C C G T A A C T G A C T G A G T C C G T A A C T G A G C T A G T C G T C A A C G T A C T G A T G C
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGGCAGTCATGC
ACAGGAAGTG----
 A C G T A G T C C G T A A C T G A C T G A G T C C G T A A C T G A G C T A G T C G T C A A C G T A C T G A T G C
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGGCAGTCATGC
NACAGGAAAT-----
 A C G T A C G T A G T C C G T A A C T G A C T G A G T C C G T A A C T G A G C T A G T C G T C A A C G T A C T G A T G C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CAGGCAGTCATGC
-----AGTCACGC
 A G T C C G T A A C T G A C T G A G T C C G T A A C T G A G C T A G T C G T C A A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CAGGCAGTCATGC
------GTCATN-
 A G T C C G T A A C T G A C T G A G T C C G T A A C T G A G C T A G T C G T C A A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGGCAGTCATGC
NACCGGAAGT-----
 A C G T A C G T A G T C C G T A A C T G A C T G A G T C C G T A A C T G A G C T A G T C G T C A A C G T A C T G A T G C
T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T A C G T