Information for 12-TTCGAKAGTCTAC (Motif 21)

A G C T A C G T A T G C C T A G C T G A C A G T C T G A A C T G A C G T A G T C A G C T C T G A A G T C
Reverse Opposite:
A C T G G A C T C T G A C T A G C G T A T G A C A G C T G T C A A G C T A G T C T A C G T C G A C T G A
p-value:1e-8
log p-value:-1.860e+01
Information Content per bp:1.729
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.0 +/- 23.1bp
Average Position of motif in Background32.9 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTCGAKAGTCTAC---
GGCAAAAGTCCAATAA
 A G C T A C G T A T G C C T A G C T G A C A G T C T G A A C T G A C G T A G T C A G C T C T G A A G T C A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TTCGAKAGTCTAC
-----TWGTCTGV
 A G C T A C G T A T G C C T A G C T G A C A G T C T G A A C T G A C G T A G T C A G C T C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

HSF1/MA0486.2/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTCGAKAGTCTAC
TTCTAGAACGTTC
 A G C T A C G T A T G C C T A G C T G A C A G T C T G A A C T G A C G T A G T C A G C T C T G A A G T C
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C

HSF4/MA0771.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTCGAKAGTCTAC
TTCTAGAACGTTC
 A G C T A C G T A T G C C T A G C T G A C A G T C T G A A C T G A C G T A G T C A G C T C T G A A G T C
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C

HSF2/MA0770.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTCGAKAGTCTAC
TTCTAGAACGTTC
 A G C T A C G T A T G C C T A G C T G A C A G T C T G A A C T G A C G T A G T C A G C T C T G A A G T C
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTCGAKAGTCTAC--
TTCTAGAABNTTCTA
 A G C T A C G T A T G C C T A G C T G A C A G T C T G A A C T G A C G T A G T C A G C T C T G A A G T C A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.50
Offset:8
Orientation:forward strand
Alignment:TTCGAKAGTCTAC-
--------GCTTCC
 A G C T A C G T A T G C C T A G C T G A C A G T C T G A A C T G A C G T A G T C A G C T C T G A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TTCGAKAGTCTAC
---VBSYGTCTGG
 A G C T A C G T A T G C C T A G C T G A C A G T C T G A A C T G A C G T A G T C A G C T C T G A A G T C
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:TTCGAKAGTCTAC
---CACATTCCAT
 A G C T A C G T A T G C C T A G C T G A C A G T C T G A A C T G A C G T A G T C A G C T C T G A A G T C
A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:forward strand
Alignment:TTCGAKAGTCTAC-------
----ACATGCTACCTAATAC
 A G C T A C G T A T G C C T A G C T G A C A G T C T G A A C T G A C G T A G T C A G C T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C