Information for 2-GTCCAAGATGGCGGCT (Motif 2)

A C T G A G C T A G T C G A T C C T G A C T G A T A C G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G T C A C G T
Reverse Opposite:
T G C A C T A G A G T C T G A C A C T G A G T C A G T C C G T A A C G T A G T C A G C T A G C T C T A G A C T G T C G A T G A C
p-value:1e-18
log p-value:-4.349e+01
Information Content per bp:1.758
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.4 +/- 15.4bp
Average Position of motif in Background66.7 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.89
Offset:3
Orientation:forward strand
Alignment:GTCCAAGATGGCGGCT
---CAAGATGGCGGC-
 A C T G A G C T A G T C G A T C C T G A C T G A T A C G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.89
Offset:3
Orientation:forward strand
Alignment:GTCCAAGATGGCGGCT
---CAAGATGGCGGC-
 A C T G A G C T A G T C G A T C C T G A C T G A T A C G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.72
Offset:5
Orientation:reverse strand
Alignment:GTCCAAGATGGCGGCT
-----TAATGGCGGNC
 A C T G A G C T A G T C G A T C C T G A C T G A T A C G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTCCAAGATGGCGGCT----
---NAGANTGGCGGGGNGNA
 A C T G A G C T A G T C G A T C C T G A C T G A T A C G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTCCAAGATGGCGGCT
KCCAAAAATAGC----
 A C T G A G C T A G T C G A T C C T G A C T G A T A C G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G T C A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTCCAAGATGGCGGCT
GTCATGCHTGRCTGS-
 A C T G A G C T A G T C G A T C C T G A C T G A T A C G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G T C A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTCCAAGATGGCGGCT
--AACAGATGGC----
 A C T G A G C T A G T C G A T C C T G A C T G A T A C G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G T C A C G T
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTCCAAGATGGCGGCT
-CCATATATGG-----
 A C T G A G C T A G T C G A T C C T G A C T G A T A C G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G T C A C G T
A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T A C G T A C G T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GTCCAAGATGGCGGCT----
----AAAATGGCGCCATTTT
 A C T G A G C T A G T C G A T C C T G A C T G A T A C G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTCCAAGATGGCGGCT
-CCATATATGGNA---
 A C T G A G C T A G T C G A T C C T G A C T G A T A C G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G T C A C G T
A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A A C G T A C G T A C G T