Information for 6-TMCCGSAACD (Motif 12)

A C G T G T C A A G T C A T G C A T C G T A C G T C G A C G T A A G T C C G A T
Reverse Opposite:
G C T A A C T G A C G T A G C T A T G C A T G C A T C G A C T G C A G T G T C A
p-value:1e-9
log p-value:-2.298e+01
Information Content per bp:1.753
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif17.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets41.0 +/- 22.6bp
Average Position of motif in Background43.3 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TMCCGSAACD
CTTCCNGGAA--
 A C G T A C G T A C G T G T C A A G T C A T G C A T C G T A C G T C G A C G T A A G T C C G A T
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TMCCGSAACD
TTTCCTGGAAA-
 A C G T A C G T A C G T G T C A A G T C A T G C A T C G T A C G T C G A C G T A A G T C C G A T
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TMCCGSAACD-
-RCCGGAAGTD
 A C G T G T C A A G T C A T G C A T C G T A C G T C G A C G T A A G T C C G A T A C G T
A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G

PB0020.1_Gabpa_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TMCCGSAACD----
CAATACCGGAAGTGTAA
 A C G T A C G T A C G T A C G T G T C A A G T C A T G C A T C G T A C G T C G A C G T A A G T C C G A T A C G T A C G T A C G T A C G T
G T A C T G A C G C T A G C A T C T G A T A G C T G A C A C T G A C T G C G T A C G T A T C A G G A C T C A T G G A C T C G T A T C G A

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TMCCGSAACD-
-RCCGGAARYN
 A C G T G T C A A G T C A T G C A T C G T A C G T C G A C G T A A G T C C G A T A C G T
A C G T T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TMCCGSAACD
NNCTTCCNGGAAGN
 A C G T A C G T A C G T A C G T A C G T G T C A A G T C A T G C A T C G T A C G T C G A C G T A A G T C C G A T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

PB0162.1_Sfpi1_2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TMCCGSAACD
CAAATTCCGGAACC
 A C G T A C G T A C G T A C G T A C G T G T C A A G T C A T G C A T C G T A C G T C G A C G T A A G T C C G A T
G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C

ELK3/MA0759.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TMCCGSAACD-
-ACCGGAAGTA
 A C G T G T C A A G T C A T G C A T C G T A C G T C G A C G T A A G T C C G A T A C G T
A C G T C T G A T G A C T G A C C T A G A C T G T G C A G C T A T C A G A G C T C T G A

PB0035.1_Irf5_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TMCCGSAACD--
ATAAACCGAAACCAA
 A C G T A C G T A C G T A C G T G T C A A G T C A T G C A T C G T A C G T C G A C G T A A G T C C G A T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

ELK1/MA0028.2/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TMCCGSAACD-
-ACCGGAAGTG
 A C G T G T C A A G T C A T G C A T C G T A C G T C G A C G T A A G T C C G A T A C G T
A C G T C T G A T A G C T G A C A C T G A C T G T G C A G C T A T C A G A G C T C T A G