Information for 5-CAACAAGGTT (Motif 10)

A T G C C G T A C T G A A T G C C G T A G T C A A C T G A C T G C A G T A G C T
Reverse Opposite:
T C G A G T C A G T A C A G T C C A G T A C G T T A C G A G C T A C G T A T C G
p-value:1e-11
log p-value:-2.588e+01
Information Content per bp:1.845
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif102.8
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets61.1 +/- 26.0bp
Average Position of motif in Background49.2 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAACAAGGTT--
CAAGATGGCGGC
 A T G C C G T A C T G A A T G C C G T A G T C A A C T G A C T G C A G T A G C T A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

HLTF/MA0109.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAACAAGGTT
NNATAAGGNN
 A T G C C G T A C T G A A T G C C G T A G T C A A C T G A C T G C A G T A G C T
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAACAAGGTT
--ACAAAG--
 A T G C C G T A C T G A A T G C C G T A G T C A A C T G A C T G C A G T A G C T
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAACAAGGTT
---CAAGCTT
 A T G C C G T A C T G A A T G C C G T A G T C A A C T G A C T G C A G T A G C T
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAACAAGGTT--
--TCAAGGTCAT
 A T G C C G T A C T G A A T G C C G T A G T C A A C T G A C T G C A G T A G C T A C G T A C G T
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAACAAGGTT--
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T A T G C C G T A C T G A A T G C C G T A G T C A A C T G A C T G C A G T A G C T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAACAAGGTT---
---CAAGGHCANV
 A T G C C G T A C T G A A T G C C G T A G T C A A C T G A C T G C A G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PB0161.1_Rxra_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAACAAGGTT-----
TCGCGAAGGTTGTACT
 A C G T A T G C C G T A C T G A A T G C C G T A G T C A A C T G A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAACAAGGTT------
TATTCAAGGTCATGCGA
 A C G T A T G C C G T A C T G A A T G C C G T A G T C A A C T G A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

PB0197.1_Zfp105_2/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CAACAAGGTT-
ATGGTTCAATAATTTTG
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A A T G C C G T A G T C A A C T G A C T G C A G T A G C T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G