Information for 2-GGAGGCTCACCGA (Motif 5)

A C T G A C T G G T C A C T A G A C T G A G T C A C G T A G T C C G T A A G T C A T G C A C T G C G T A
Reverse Opposite:
A C G T A G T C A T C G A C T G C G A T A C T G C G T A A C T G A G T C A G T C A C G T A G T C A G T C
p-value:1e-10
log p-value:-2.454e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 28.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGAGGCTCACCGA
---NGCTN-----
 A C T G A C T G G T C A C T A G A C T G A G T C A C G T A G T C C G T A A G T C A T G C A C T G C G T A
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGAGGCTCACCGA-
TTGGGGGCGCCCCTAG
 A C G T A C G T A C T G A C T G G T C A C T A G A C T G A G T C A C G T A G T C C G T A A G T C A T G C A C T G C G T A A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GGAGGCTCACCGA
--NGGATTAN---
 A C T G A C T G G T C A C T A G A C T G A G T C A C G T A G T C C G T A A G T C A T G C A C T G C G T A
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GGAGGCTCACCGA
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C T G A C T G G T C A C T A G A C T G A G T C A C G T A G T C C G T A A G T C A T G C A C T G C G T A
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GGAGGCTCACCGA
NTNNNAGGAGTCTCNTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T C A C T A G A C T G A G T C A C G T A G T C C G T A A G T C A T G C A C T G C G T A
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGAGGCTCACCGA
TGGGGCCCAC---
 A C T G A C T G G T C A C T A G A C T G A G T C A C G T A G T C C G T A A G T C A T G C A C T G C G T A
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GGAGGCTCACCGA
----GCTCCG---
 A C T G A C T G G T C A C T A G A C T G A G T C A C G T A G T C C G T A A G T C A T G C A C T G C G T A
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GGAGGCTCACCGA
--AAGGTCAC---
 A C T G A C T G G T C A C T A G A C T G A G T C A C G T A G T C C G T A A G T C A T G C A C T G C G T A
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.48
Offset:3
Orientation:forward strand
Alignment:GGAGGCTCACCGA
---GCCACACCCA
 A C T G A C T G G T C A C T A G A C T G A G T C A C G T A G T C C G T A A G T C A T G C A C T G C G T A
A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:GGAGGCTCACCGA--
---GGACCACCCACG
 A C T G A C T G G T C A C T A G A C T G A G T C A C G T A G T C C G T A A G T C A T G C A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G