Information for 6-ATCRCAACCA (Motif 9)

C G T A A C G T G T A C C T A G A G T C C G T A C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T C T A G A C T G A C G T A C G T A C T G A G T C A C T G C G T A A C G T
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.910
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.0 +/- 26.2bp
Average Position of motif in Background62.0 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATCRCAACCA---
ATGTCACAACAACAC
 A C G T A C G T C G T A A C G T G T A C C T A G A G T C C G T A C G T A A G T C A G T C C G T A A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0035.1_Irf5_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATCRCAACCA-
ATAAACCGAAACCAA
 A C G T A C G T A C G T A C G T C G T A A C G T G T A C C T A G A G T C C G T A C G T A A G T C A G T C C G T A A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATCRCAACCA-
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T C G T A A C G T G T A C C T A G A G T C C G T A C G T A A G T C A G T C C G T A A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0034.1_Irf4_1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATCRCAACCA--
CGTATCGAAACCAAA
 A C G T A C G T A C G T C G T A A C G T G T A C C T A G A G T C C G T A C G T A A G T C A G T C C G T A A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0036.1_Irf6_1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATCRCAACCA----
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T C G T A A C G T G T A C C T A G A G T C C G T A C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATCRCAACCA-
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T C G T A A C G T G T A C C T A G A G T C C G T A C G T A A G T C A G T C C G T A A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.63
Offset:-8
Orientation:forward strand
Alignment:--------ATCRCAACCA-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T A C C T A G A G T C C G T A C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATCRCAACCA---
ACTATGCCAACCTACC
 A C G T A C G T A C G T C G T A A C G T G T A C C T A G A G T C C G T A C G T A A G T C A G T C C G T A A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ATCRCAACCA-
---CCAATCAA
 C G T A A C G T G T A C C T A G A G T C C G T A C G T A A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ATCRCAACCA-
CAAAATCGAAACTAA
 A C G T A C G T A C G T A C G T C G T A A C G T G T A C C T A G A G T C C G T A C G T A A G T C A G T C C G T A A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A