Information for 1-CAGCTGTCAT (Motif 3)

T A G C G T C A A T C G T A G C A C G T T A C G C A G T T A G C G T C A C G A T
Reverse Opposite:
G C T A C A G T A T C G G T C A A T G C T G C A A T C G T A G C C A G T A T C G
p-value:1e-13
log p-value:-3.150e+01
Information Content per bp:1.681
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif9.34%
Number of Background Sequences with motif1765.9
Percentage of Background Sequences with motif3.73%
Average Position of motif in Targets47.2 +/- 25.0bp
Average Position of motif in Background50.3 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myog/MA0500.1/Jaspar

Match Rank:1
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGTCAT
NNGCAGCTGTC--
A C G T A C G T A C G T T A G C G T C A A T C G T A G C A C G T T A C G C A G T T A G C G T C A C G A T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:2
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGTCAT
NNGCAGCTGTT--
A C G T A C G T A C G T T A G C G T C A A T C G T A G C A C G T T A C G C A G T T A G C G T C A C G A T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGTCAT----
NNNCAGCTGTCAATATN
A C G T A C G T A C G T T A G C G T C A A T C G T A G C A C G T T A C G C A G T T A G C G T C A C G A T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:CAGCTGTCAT
CAGCTGTT--
T A G C G T C A A T C G T A G C A C G T T A C G C A G T T A G C G T C A C G A T
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGTCAT
ACAGCTGTTV-
A C G T T A G C G T C A A T C G T A G C A C G T T A C G C A G T T A G C G T C A C G A T
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGTCAT-
TGCAGCTGTCCCT
A C G T A C G T T A G C G T C A A T C G T A G C A C G T T A C G C A G T T A G C G T C A C G A T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGTCAT
NAHCAGCTGD---
A C G T A C G T A C G T T A G C G T C A A T C G T A G C A C G T T A C G C A G T T A G C G T C A C G A T
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGTCAT
NAACAGCTGT---
A C G T A C G T A C G T T A G C G T C A A T C G T A G C A C G T T A C G C A G T T A G C G T C A C G A T
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGTCAT
GCAGCTGTNN-
A C G T T A G C G T C A A T C G T A G C A C G T T A C G C A G T T A G C G T C A C G A T
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:10
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGTCAT
TGACAGCTGTCA-
A C G T A C G T A C G T T A G C G T C A A T C G T A G C A C G T T A C G C A G T T A G C G T C A C G A T
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T