p-value: | 1e-5 |
log p-value: | -1.363e+01 |
Information Content per bp: | 1.900 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.33% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 37.8 +/- 25.3bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCTTTYRAAAGCY ---TTTGAAACCG |
|
|
|
TATA-Box(TBP)/Promoter/Homer
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTTTYRAAAGCY GNCTATAAAAGG- |
|
|
|
LIN54/MA0619.1/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTTTYRAAAGCY -NATTCAAAT--- |
|
|
|
MEF2B/MA0660.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTTTYRAAAGCY GCTATAAATAGC- |
|
|
|
PH0170.1_Tgif2/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTTTYRAAAGCY---- -GTATTGACAGCTNNTT |
|
|
|
HOXC13/MA0907.1/Jaspar
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTTTYRAAAGCY GCTCGTAAAAA-- |
|
|
|
Nr2e3/MA0164.1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | GCTTTYRAAAGCY-- --------AAGCTTG |
|
|
|
PH0102.1_Meis1/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTTTYRAAAGCY---- -NTATTGACAGCTNNTT |
|
|
|
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
Match Rank: | 9 |
Score: | 0.51 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCTTTYRAAAGCY ---TTTAATTGCN |
|
|
|
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer
Match Rank: | 10 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTTTYRAAAGCY TGGTTTCAGT---- |
|
|
|