Information for 11-AGGCTAACTT (Motif 20)

C G T A C A T G A C T G G A T C A G C T T C G A G C T A A G T C G C A T A G C T
Reverse Opposite:
T C G A C G T A T C A G C G A T A G C T T C G A C T A G T G A C G T A C G C A T
p-value:1e-9
log p-value:-2.087e+01
Information Content per bp:1.669
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.69%
Number of Background Sequences with motif502.9
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets50.2 +/- 25.8bp
Average Position of motif in Background50.8 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0167.1_Tcf1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGGCTAACTT----
CCTTAGTTAACTAAAAT
 A C G T A C G T A C G T C G T A C A T G A C T G G A T C A G C T T C G A G C T A A G T C G C A T A G C T A C G T A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGCTAACTT----
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T C G T A C A T G A C T G G A T C A G C T T C G A G C T A A G T C G C A T A G C T A C G T A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGCTAACTT
TWGTCTGV---
 A C G T C G T A C A T G A C T G G A T C A G C T T C G A G C T A A G T C G C A T A G C T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGCTAACTT-----
AGCTGTTAACTAGCCGT
 A C G T A C G T C G T A C A T G A C T G G A T C A G C T T C G A G C T A A G T C G C A T A G C T A C G T A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

POU3F3/MA0788.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGGCTAACTT
ATTATGCTAATTT
 A C G T A C G T A C G T C G T A C A T G A C T G G A T C A G C T T C G A G C T A A G T C G C A T A G C T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AGGCTAACTT
TAAAAATGCTGACTT
 A C G T A C G T A C G T A C G T A C G T C G T A C A T G A C T G G A T C A G C T T C G A G C T A A G T C G C A T A G C T
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGCTAACTT
-NGCTN----
 C G T A C A T G A C T G G A T C A G C T T C G A G C T A A G T C G C A T A G C T
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGGCTAACTT--
---TTGACTTTT
 C G T A C A T G A C T G G A T C A G C T T C G A G C T A A G T C G C A T A G C T A C G T A C G T
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGGCTAACTT--
--GTTAACTAGN
 C G T A C A T G A C T G G A T C A G C T T C G A G C T A A G T C G C A T A G C T A C G T A C G T
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGGCTAACTT
AAGGATATNTN
 A C G T C G T A C A T G A C T G G A T C A G C T T C G A G C T A A G T C G C A T A G C T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T