Information for 11-CATCCGCCTGCCT (Motif 18)

A T G C C T G A A C G T A G T C A G T C A C T G A G T C A G T C A C G T A T C G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A T G C C G T A A C T G A C T G G T A C A C T G A C T G C G T A A G C T A T C G
p-value:1e-9
log p-value:-2.107e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.6 +/- 20.3bp
Average Position of motif in Background69.4 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0124.1_Gabpa_2/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CATCCGCCTGCCT
CCGTCTTCCCCCTCAC-
 A C G T A C G T A C G T A C G T A T G C C T G A A C G T A G T C A G T C A C T G A G T C A G T C A C G T A T C G A G T C A G T C A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CATCCGCCTGCCT-
---NNACTTGCCTT
 A T G C C T G A A C G T A G T C A G T C A C T G A G T C A G T C A C G T A T C G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CATCCGCCTGCCT
GTACATCCGGATTTTT
 A C G T A C G T A C G T A T G C C T G A A C G T A G T C A G T C A C T G A G T C A G T C A C G T A T C G A G T C A G T C A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CATCCGCCTGCCT
-SNGCACCTGCHS
 A T G C C T G A A C G T A G T C A G T C A C T G A G T C A G T C A C G T A T C G A G T C A G T C A C G T
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CATCCGCCTGCCT
CAACGTCCGCGG----
 A C G T A C G T A C G T A T G C C T G A A C G T A G T C A G T C A C T G A G T C A G T C A C G T A T C G A G T C A G T C A C G T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CATCCGCCTGCCT
--NNCACCTGNN-
 A T G C C T G A A C G T A G T C A G T C A C T G A G T C A G T C A C G T A T C G A G T C A G T C A C G T
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CATCCGCCTGCCT
TACATCCGGGT----
 A C G T A C G T A T G C C T G A A C G T A G T C A G T C A C T G A G T C A G T C A C G T A T C G A G T C A G T C A C G T
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CATCCGCCTGCCT
NACTTCCGGT-----
 A C G T A C G T A T G C C T G A A C G T A G T C A G T C A C T G A G T C A G T C A C G T A T C G A G T C A G T C A C G T
G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CATCCGCCTGCCT---------
--GCCTCCTCCMTCWGACTGKS
 A T G C C T G A A C G T A G T C A G T C A C T G A G T C A G T C A C G T A T C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CATCCGCCTGCCT
GCTCCGCCCMCY-
 A T G C C T G A A C G T A G T C A G T C A C T G A G T C A G T C A C G T A T C G A G T C A G T C A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T