Information for 8-CTGGCTTTAG (Motif 13)

G T A C A C G T A T C G A C T G A T G C C G A T A G C T A C G T C T G A A C T G
Reverse Opposite:
T G A C G A C T C G T A T C G A C G T A A T C G A G T C A T G C C G T A C A T G
p-value:1e-9
log p-value:-2.296e+01
Information Content per bp:1.846
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif125.0
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets61.0 +/- 24.4bp
Average Position of motif in Background47.8 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTGGCTTTAG
GGTCTGGCAT---
 A C G T A C G T A C G T G T A C A C G T A T C G A C T G A T G C C G A T A G C T A C G T C T G A A C T G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGGCTTTAG
TTGGCA----
 G T A C A C G T A T C G A C T G A T G C C G A T A G C T A C G T C T G A A C T G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCTTTAG
NTTGGCANN--
 A C G T G T A C A C G T A T C G A C T G A T G C C G A T A G C T A C G T C T G A A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCTTTAG----
BCNGGTTCTAGANCN
 A C G T G T A C A C G T A T C G A C T G A T G C C G A T A G C T A C G T C T G A A C T G A C G T A C G T A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTGGCTTTAG----
--GGCTCYAKCAYC
 G T A C A C G T A T C G A C T G A T G C C G A T A G C T A C G T C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTGGCTTTAG
--NGCTN---
 G T A C A C G T A T C G A C T G A T G C C G A T A G C T A C G T C T G A A C T G
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGGCTTTAG
TTGACTTTT-
 G T A C A C G T A T C G A C T G A T G C C G A T A G C T A C G T C T G A A C T G
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGGCTTTAG
CTGACCTTTG
 G T A C A C G T A T C G A C T G A T G C C G A T A G C T A C G T C T G A A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCTTTAG
GGTTGGCAT---
 A C G T A C G T G T A C A C G T A T C G A C T G A T G C C G A T A G C T A C G T C T G A A C T G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGGCTTTAG
-NGGATTAN-
 G T A C A C G T A T C G A C T G A T G C C G A T A G C T A C G T C T G A A C T G
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T