Information for 10-AACCYTGGAGAGC (Motif 11)

C G T A C G T A G T A C A G T C A G C T A C G T A T C G T A C G G T C A A C T G C G T A A C T G A T G C
Reverse Opposite:
A T C G A G T C A C G T A G T C A C G T A T G C A T G C G T C A C T G A A C T G A C T G A C G T G C A T
p-value:1e-10
log p-value:-2.432e+01
Information Content per bp:1.832
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif49.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets52.8 +/- 22.0bp
Average Position of motif in Background51.9 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AACCYTGGAGAGC---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C A G T C A G C T A C G T A T C G T A C G G T C A A C T G C G T A A C T G A T G C A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AACCYTGGAGAGC---
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T C G T A C G T A G T A C A G T C A G C T A C G T A T C G T A C G G T C A A C T G C G T A A C T G A T G C A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AACCYTGGAGAGC-
----BTBRAGTGSN
 C G T A C G T A G T A C A G T C A G C T A C G T A T C G T A C G G T C A A C T G C G T A A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AACCYTGGAGAGC-
----CTYRAGTGSY
 C G T A C G T A G T A C A G T C A G C T A C G T A T C G T A C G G T C A A C T G C G T A A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------AACCYTGGAGAGC
NNNNATGACCTTGANTN--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C A G T C A G C T A C G T A T C G T A C G G T C A A C T G C G T A A C T G A T G C
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AACCYTGGAGAGC---
-TCCCAGMCRAGCCCC
 C G T A C G T A G T A C A G T C A G C T A C G T A T C G T A C G G T C A A C T G C G T A A C T G A T G C A C G T A C G T A C G T
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

ELF4/MA0641.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AACCYTGGAGAGC
AACCCGGAAGTG-
 C G T A C G T A G T A C A G T C A G C T A C G T A T C G T A C G G T C A A C T G C G T A A C T G A T G C
C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AACCYTGGAGAGC--
-----TTGAGTGSTT
 C G T A C G T A G T A C A G T C A G C T A C G T A T C G T A C G G T C A A C T G C G T A A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AACCYTGGAGAGC
---CCTGCTGAGH
 C G T A C G T A G T A C A G T C A G C T A C G T A T C G T A C G G T C A A C T G C G T A A C T G A T G C
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ELF1/MA0473.2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AACCYTGGAGAGC
AACCCGGAAGTG-
 C G T A C G T A G T A C A G T C A G C T A C G T A T C G T A C G G T C A A C T G C G T A A C T G A T G C
C G T A G C T A G T A C T A G C G T A C A C T G A C T G C T G A G C T A C T A G G A C T T C A G A C G T