Information for 1-CACAGADGGCCTCVAG (Motif 6)

A G T C C G T A A G T C C T G A A C T G T C G A C A G T A C T G C T A G G T A C A G T C A C G T A G T C T G A C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G T G C A A C T G A C T G G A T C A G T C G T C A A G C T A G T C G A C T C T A G A C G T A C T G
p-value:1e-11
log p-value:-2.572e+01
Information Content per bp:1.789
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.9 +/- 18.1bp
Average Position of motif in Background49.4 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CACAGADGGCCTCVAG
GAGCACAGCAGGACA----
 A C G T A C G T A C G T A G T C C G T A A G T C C T G A A C T G T C G A C A G T A C T G C T A G G T A C A G T C A C G T A G T C T G A C C G T A A C T G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CACAGADGGCCTCVAG
AACAGATGGC------
 A G T C C G T A A G T C C T G A A C T G T C G A C A G T A C T G C T A G G T A C A G T C A C G T A G T C T G A C C G T A A C T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CACAGADGGCCTCVAG
AACAGATGGT------
 A G T C C G T A A G T C C T G A A C T G T C G A C A G T A C T G C T A G G T A C A G T C A C G T A G T C T G A C C G T A A C T G
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CACAGADGGCCTCVAG
DCHCAGCAGGRGGCC--
 A C G T A G T C C G T A A G T C C T G A A C T G T C G A C A G T A C T G C T A G G T A C A G T C A C G T A G T C T G A C C G T A A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CACAGADGGCCTCVAG
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A G T C C G T A A G T C C T G A A C T G T C G A C A G T A C T G C T A G G T A C A G T C A C G T A G T C T G A C C G T A A C T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CACAGADGGCCTCVAG---
--CATAAGACCACCATTAC
 A G T C C G T A A G T C C T G A A C T G T C G A C A G T A C T G C T A G G T A C A G T C A C G T A G T C T G A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.47
Offset:6
Orientation:forward strand
Alignment:CACAGADGGCCTCVAG
------AGGCCTAG--
 A G T C C G T A A G T C C T G A A C T G T C G A C A G T A C T G C T A G G T A C A G T C A C G T A G T C T G A C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:CACAGADGGCCTCVAG
CACAGN----------
 A G T C C G T A A G T C C T G A A C T G T C G A C A G T A C T G C T A G G T A C A G T C A C G T A G T C T G A C C G T A A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.46
Offset:3
Orientation:forward strand
Alignment:CACAGADGGCCTCVAG--
---TGACANARRCCAGRC
 A G T C C G T A A G T C C T G A A C T G T C G A C A G T A C T G C T A G G T A C A G T C A C G T A G T C T G A C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:10
Score:0.46
Offset:1
Orientation:forward strand
Alignment:CACAGADGGCCTCVAG-----
-VCAKCTGGNNNCCAGMTGBN
 A G T C C G T A A G T C C T G A A C T G T C G A C A G T A C T G C T A G G T A C A G T C A C G T A G T C T G A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C