Information for 1-CAGCCTCTGT (Motif 4)

T A G C C G T A A C T G A G T C A T G C C G A T A G T C A G C T C T A G A C G T
Reverse Opposite:
T G C A A G T C T C G A C T A G G C T A A T C G A C T G A G T C A C G T A T C G
p-value:1e-12
log p-value:-2.980e+01
Information Content per bp:1.808
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif5.54%
Number of Background Sequences with motif744.7
Percentage of Background Sequences with motif1.53%
Average Position of motif in Targets54.2 +/- 26.7bp
Average Position of motif in Background51.6 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CAGCCTCTGT
CAGCC-----
 T A G C C G T A A C T G A G T C A T G C C G A T A G T C A G C T C T A G A C G T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCTCTGT----
CNNNGCTACTGTANNN
 A C G T A C G T T A G C C G T A A C T G A G T C A T G C C G A T A G T C A G C T C T A G A C G T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCTCTGT----
TNNTGCTACTGTNNNN
 A C G T A C G T T A G C C G T A A C T G A G T C A T G C C G A T A G T C A G C T C T A G A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCTCTGT
BCAGACWA---
 A C G T T A G C C G T A A C T G A G T C A T G C C G A T A G T C A G C T C T A G A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGCCTCTGT-
---CCTTTGTT
 T A G C C G T A A C T G A G T C A T G C C G A T A G T C A G C T C T A G A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCTCTGT---------
YCAGGCWCAGTACCAGGCTC
 A C G T T A G C C G T A A C T G A G T C A T G C C G A T A G T C A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCTCTGT
CACAGN------
 A C G T A C G T T A G C C G T A A C T G A G T C A T G C C G A T A G T C A G C T C T A G A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGCCTCTGT-
-ACCATCTGTT
 T A G C C G T A A C T G A G T C A T G C C G A T A G T C A G C T C T A G A C G T A C G T
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGCCTCTGT
CAGCAGCTGN
 T A G C C G T A A C T G A G T C A T G C C G A T A G T C A G C T C T A G A C G T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCTCTGT-
NNAGCAGCTGCT
 A C G T T A G C C G T A A C T G A G T C A T G C C G A T A G T C A G C T C T A G A C G T A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T