Information for 9-CATGGCCAGG (Motif 16)

A T G C C G T A C A G T A T C G C T A G T G A C A G T C C G T A C T A G A C T G
Reverse Opposite:
A G T C A G T C C G A T A C T G A C T G A G T C T A G C G T C A G C A T A T C G
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.843
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.59%
Number of Background Sequences with motif262.6
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets61.1 +/- 23.8bp
Average Position of motif in Background49.0 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CATGGCCAGG---
ACATGCCCGGGCAT
 A C G T A T G C C G T A C A G T A T C G C T A G T G A C A G T C C G T A C T A G A C T G A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CATGGCCAGG
CAAGGHCANV
 A T G C C G T A C A G T A T C G C T A G T G A C A G T C C G T A C T A G A C T G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CATGGCCAGG--
--TGCCCAGNHW
 A T G C C G T A C A G T A T C G C T A G T G A C A G T C C G T A C T A G A C T G A C G T A C G T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CATGGCCAGG
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C A G T A T C G C T A G T G A C A G T C C G T A C T A G A C T G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATGGCCAGG
NTCAAGGTCA--
 A C G T A C G T A T G C C G T A C A G T A T C G C T A G T G A C A G T C C G T A C T A G A C T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATGGCCAGG
BTCAAGGTCA--
 A C G T A C G T A T G C C G T A C A G T A T C G C T A G T G A C A G T C C G T A C T A G A C T G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CATGGCCAGG-----
-----VCAGGTRDRY
 A T G C C G T A C A G T A T C G C T A G T G A C A G T C C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CATGGCCAGG
---TGCCAA-
 A T G C C G T A C A G T A T C G C T A G T G A C A G T C C G T A C T A G A C T G
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CATGGCCAGG
-CGTGCCAAG
 A T G C C G T A C A G T A T C G C T A G T G A C A G T C C G T A C T A G A C T G
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CATGGCCAGG----
----NNCAGGTGNN
 A T G C C G T A C A G T A T C G C T A G T G A C A G T C C G T A C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G