Information for 8-AWTGYARATAWTG (Motif 11)

C G T A C G T A A C G T A C T G A G T C C G T A C T G A C G T A A C G T C G T A C G T A C A G T A C T G
Reverse Opposite:
A G T C G C T A C G A T A C G T G T C A A C G T A G C T A C G T C T A G A G T C C G T A C G A T A C G T
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.2 +/- 27.6bp
Average Position of motif in Background36.4 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AWTGYARATAWTG
TATGTAAATAT--
 C G T A C G T A A C G T A C T G A G T C C G T A C T G A C G T A A C G T C G T A C G T A C A G T A C T G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AWTGYARATAWTG--
TAAATGTAAACAAAGGT
 A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C T G A C G T A A C G T C G T A C G T A C A G T A C T G A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AWTGYARATAWTG--
AAAAAGTAAACAAAGAC
 A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C T G A C G T A A C G T C G T A C G T A C A G T A C T G A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AWTGYARATAWTG
ATATGCAAATNNN-
 A C G T C G T A C G T A A C G T A C T G A G T C C G T A C T G A C G T A A C G T C G T A C G T A C A G T A C T G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AWTGYARATAWTG
TATGTAAATAT--
 C G T A C G T A A C G T A C T G A G T C C G T A C T G A C G T A A C G T C G T A C G T A C A G T A C T G
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AWTGYARATAWTG
TTATGCAAAT----
 A C G T C G T A C G T A A C G T A C T G A G T C C G T A C T G A C G T A A C G T C G T A C G T A C A G T A C T G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AWTGYARATAWTG--
AAAATGTAAACAAACAG
 A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C T G A C G T A A C G T C G T A C G T A C A G T A C T G A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AWTGYARATAWTG--
AAAATGTAAACAAACAG
 A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C T G A C G T A A C G T C G T A C G T A C A G T A C T G A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AWTGYARATAWTG-
CAAAGTAAACANNNN
 A C G T C G T A C G T A A C G T A C T G A G T C C G T A C T G A C G T A A C G T C G T A C G T A C A G T A C T G A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AWTGYARATAWTG
ATATGCAAAT----
 A C G T C G T A C G T A A C G T A C T G A G T C C G T A C T G A C G T A A C G T C G T A C G T A C A G T A C T G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T