Information for 5-GCCACCTAGTGGT (Motif 9)

A T C G T A G C G T A C G T C A A G T C A G T C A G C T C T G A A T C G A C G T A C T G T A C G A G C T
Reverse Opposite:
T C G A A T G C A G T C G T C A T A G C A G C T T C G A A C T G T C A G C A G T A C T G A T C G A T G C
p-value:1e-10
log p-value:-2.391e+01
Information Content per bp:1.716
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif99.6
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets61.1 +/- 28.6bp
Average Position of motif in Background51.2 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.82
Offset:-5
Orientation:forward strand
Alignment:-----GCCACCTAGTGGT--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A T C G T A G C G T A C G T C A A G T C A G T C A G C T C T G A A T C G A C G T A C T G T A C G A G C T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----GCCACCTAGTGGT--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A T C G T A G C G T A C G T C A A G T C A G T C A G C T C T G A A T C G A C G T A C T G T A C G A G C T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.78
Offset:-7
Orientation:forward strand
Alignment:-------GCCACCTAGTGGT
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A G C G T A C G T C A A G T C A G T C A G C T C T G A A T C G A C G T A C T G T A C G A G C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

SCRT1/MA0743.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCACCTAGTGGT-
ANCCACCTGTTGCNC
 A C G T A T C G T A G C G T A C G T C A A G T C A G T C A G C T C T G A A T C G A C G T A C T G T A C G A G C T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

SCRT2/MA0744.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCACCTAGTGGT-
-CCACCTGTTGCAT
 A T C G T A G C G T A C G T C A A G T C A G T C A G C T C T G A A T C G A C G T A C T G T A C G A G C T A C G T
A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCACCTAGTGGT--
GGCACCCAGGGGTGC
 A T C G T A G C G T A C G T C A A G T C A G T C A G C T C T G A A T C G A C G T A C T G T A C G A G C T A C G T A C G T
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCACCTAGTGGT
TGACACCT------
 A C G T A T C G T A G C G T A C G T C A A G T C A G T C A G C T C T G A A T C G A C G T A C T G T A C G A G C T
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCACCTAGTGGT
NNCACCTGNN---
 A T C G T A G C G T A C G T C A A G T C A G T C A G C T C T G A A T C G A C G T A C T G T A C G A G C T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCACCTAGTGGT
SNGCACCTGCHS--
 A C G T A T C G T A G C G T A C G T C A A G T C A G T C A G C T C T G A A T C G A C G T A C T G T A C G A G C T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCACCTAGTGGT
GCCATCTGTT---
 A T C G T A G C G T A C G T C A A G T C A G T C A G C T C T G A A T C G A C G T A C T G T A C G A G C T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T