Information for 5-CHGCCCTGTGTCCTGC (Motif 8)

A G T C G A C T A T C G A T G C A G T C A G T C C G A T A C T G C G A T A T C G G A C T A G T C A G T C A C G T A C T G A G T C
Reverse Opposite:
C T A G G T A C C G T A A C T G A C T G C T G A A T G C C G T A G T A C C G T A A C T G A C T G A T C G A T G C C G T A T A C G
p-value:1e-10
log p-value:-2.456e+01
Information Content per bp:1.826
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.4 +/- 26.1bp
Average Position of motif in Background46.2 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CHGCCCTGTGTCCTGC
-TGACCTTTGCCCTA-
 A G T C G A C T A T C G A T G C A G T C A G T C C G A T A C T G C G A T A T C G G A C T A G T C A G T C A C G T A C T G A G T C
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CHGCCCTGTGTCCTGC
-TGACCTTTGCCCTAN
 A G T C G A C T A T C G A T G C A G T C A G T C C G A T A C T G C G A T A T C G G A C T A G T C A G T C A C G T A C T G A G T C
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CHGCCCTGTGTCCTGC
-TGACCTCTGACCCCN
 A G T C G A C T A T C G A T G C A G T C A G T C C G A T A C T G C G A T A T C G G A C T A G T C A G T C A C G T A C T G A G T C
A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CHGCCCTGTGTCCTGC
-TGACCTTTGCCCCA-
 A G T C G A C T A T C G A T G C A G T C A G T C C G A T A C T G C G A T A T C G G A C T A G T C A G T C A C G T A C T G A G T C
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CHGCCCTGTGTCCTGC
-TGACCTTTGACCTC-
 A G T C G A C T A T C G A T G C A G T C A G T C C G A T A C T G C G A T A T C G G A C T A G T C A G T C A C G T A C T G A G T C
A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CHGCCCTGTGTCCTGC
-------GTGACCTT-
 A G T C G A C T A T C G A T G C A G T C A G T C C G A T A C T G C G A T A T C G G A C T A G T C A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CHGCCCTGTGTCCTGC
----GCTGTG------
 A G T C G A C T A T C G A T G C A G T C A G T C C G A T A C T G C G A T A T C G G A C T A G T C A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CHGCCCTGTGTCCTGC-
-------ATTTCCTGTN
 A G T C G A C T A T C G A T G C A G T C A G T C C G A T A C T G C G A T A T C G G A C T A G T C A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CHGCCCTGTGTCCTGC
-TGACCTTTGACCTN-
 A G T C G A C T A T C G A T G C A G T C A G T C C G A T A C T G C G A T A T C G G A C T A G T C A G T C A C G T A C T G A G T C
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T

REST/MA0138.2/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CHGCCCTGTGTCCTGC-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A G T C G A C T A T C G A T G C A G T C A G T C C G A T A C T G C G A T A T C G G A C T A G T C A G T C A C G T A C T G A G T C A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A