Information for 9-TTTCATTAGC (Motif 22)

A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A C G T A A C G T A C T G C G T A C G T A C G T A
p-value:1e-5
log p-value:-1.308e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.0 +/- 14.9bp
Average Position of motif in Background55.9 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTTCATTAGC
TTTTATTRGN
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTTCATTAGC
NTTTTATTGG-
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T

MNX1/MA0707.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTCATTAGC
TTTAATTANN
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C
C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TTTCATTAGC
--YCATTAMC
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C
A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTTCATTAGC--
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTCATTAGC
TTTTTATTGG-
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T

HOXA2/MA0900.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTTCATTAGC
CCTAATTACC
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C
T A G C T A G C G A C T T G C A T C G A A C G T G A C T G C T A T A G C T A G C

mix-a/MA0621.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTTCATTAGC
AATTAATTAGT
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

VAX2/MA0723.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTTCATTAGC
-NTAATTAG-
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C
A C G T T C A G G A C T G T C A G C T A C G A T C A G T C T G A T C A G A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTTCATTAGC
ACTAATTAGC
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A G T C
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C