Information for 4-AGAGAGAGGC (Motif 14)

C T G A C T A G C G T A T A C G C T G A C T A G G T C A T A C G T A C G G A T C
Reverse Opposite:
C T A G A T G C A T G C C A G T G A T C G A C T A T G C G A C T G A T C G A C T
p-value:1e-9
log p-value:-2.132e+01
Information Content per bp:1.646
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif11.80%
Number of Background Sequences with motif2911.6
Percentage of Background Sequences with motif6.07%
Average Position of motif in Targets50.5 +/- 25.7bp
Average Position of motif in Background50.2 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGAGAGAGGC
GAAAGTGAAAGT-
 A C G T A C G T A C G T C T G A C T A G C G T A T A C G C T G A C T A G G T C A T A C G T A C G G A T C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AGAGAGAGGC
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T A C G T C T G A C T A G C G T A T A C G C T G A C T A G G T C A T A C G T A C G G A T C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAGAGGC
TGAGTGACAGSC
 A C G T A C G T C T G A C T A G C G T A T A C G C T G A C T A G G T C A T A C G T A C G G A T C
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGAGAGAGGC
GGGGNGGGGC
 C T G A C T A G C G T A T A C G C T G A C T A G G T C A T A C G T A C G G A T C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGAGAGAGGC
DGGGYGKGGC
 C T G A C T A G C G T A T A C G C T G A C T A G G T C A T A C G T A C G G A T C
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGAGAGAGGC-
AGAAAGTGAAAGTGA
 A C G T A C G T A C G T A C G T C T G A C T A G C G T A T A C G C T G A C T A G G T C A T A C G T A C G G A T C A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGAGAGGC
TGGGTGGGGC
 C T G A C T A G C G T A T A C G C T G A C T A G G T C A T A C G T A C G G A T C
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGAGAGGC----
GGAGAAAGGTGCGA
 C T G A C T A G C G T A T A C G C T G A C T A G G T C A T A C G T A C G G A T C A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGAGAGAGGC--
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T C T G A C T A G C G T A T A C G C T G A C T A G G T C A T A C G T A C G G A T C A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGAGAGAGGC-
MKGGGYGTGGCC
 A C G T C T G A C T A G C G T A T A C G C T G A C T A G G T C A T A C G T A C G G A T C A C G T
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C