Information for 3-CTCCGGGCGC (Motif 13)

A G T C G C A T A G T C A G T C A T C G A T C G C A T G T G A C A C T G A T G C
Reverse Opposite:
A T C G T G A C A C T G G T A C A T G C T A G C A C T G T C A G C G T A A C T G
p-value:1e-9
log p-value:-2.137e+01
Information Content per bp:1.825
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif338.3
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets48.0 +/- 22.9bp
Average Position of motif in Background51.2 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTCCGGGCGC
GCTCCG-----
 A C G T A G T C G C A T A G T C A G T C A T C G A T C G C A T G T G A C A C T G A T G C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTCCGGGCGC------
NNNGGGGCGCCCCCNN
 A G T C G C A T A G T C A G T C A T C G A T C G C A T G T G A C A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CTCCGGGCGC---
-----GGCGCGCT
 A G T C G C A T A G T C A G T C A T C G A T C G C A T G T G A C A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCCGGGCGC
-TNNGGGCAG
 A G T C G C A T A G T C A G T C A T C G A T C G C A T G T G A C A C T G A T G C
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGGCGC
TGCCCCCGGGCA-
 A C G T A C G T A C G T A G T C G C A T A G T C A G T C A T C G A T C G C A T G T G A C A C T G A T G C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGGCGC
NRYTTCCGGY---
 A C G T A C G T A C G T A G T C G C A T A G T C A G T C A T C G A T C G C A T G T G A C A C T G A T G C
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCCGGGCGC------
-NTCGCGCGCCTTNNN
 A G T C G C A T A G T C A G T C A T C G A T C G C A T G T G A C A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

TFAP2C/MA0524.2/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTCCGGGCGC
TGCCCTNGGGCA-
 A C G T A C G T A C G T A G T C G C A T A G T C A G T C A T C G A T C G C A T G T G A C A C T G A T G C
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGGGCGC------
NNNNTTGGCGCCGANNN
 A C G T A G T C G C A T A G T C A G T C A T C G A T C G C A T G T G A C A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGGCGC
TGCCCCAGGGCA-
 A C G T A C G T A C G T A G T C G C A T A G T C A G T C A T C G A T C G C A T G T G A C A C T G A T G C
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T