Information for 4-YGCTWTGAWGTGCAAA (Motif 7)

A G T C T A C G A T G C C G A T G C A T A C G T A C T G C G T A C G A T T C A G C G A T T C A G A G T C C G T A T C G A C T G A
Reverse Opposite:
A G C T A G C T C G A T C T A G A G T C C G T A A G T C C G T A A C G T A G T C C G T A C G T A C G T A A T C G A T G C T C A G
p-value:1e-16
log p-value:-3.760e+01
Information Content per bp:1.750
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.4 +/- 22.2bp
Average Position of motif in Background54.9 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:YGCTWTGAWGTGCAAA
-CCTTTGATGT-----
 A G T C T A C G A T G C C G A T G C A T A C G T A C T G C G T A C G A T T C A G C G A T T C A G A G T C C G T A T C G A C T G A
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:YGCTWTGAWGTGCAAA
-CCTTTGAWGT-----
 A G T C T A C G A T G C C G A T G C A T A C G T A C T G C G T A C G A T T C A G C G A T T C A G A G T C C G T A T C G A C T G A
A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:YGCTWTGAWGTGCAAA-
--CATTGTTATGCAAAT
 A G T C T A C G A T G C C G A T G C A T A C G T A C T G C G T A C G A T T C A G C G A T T C A G A G T C C G T A T C G A C T G A A C G T
A C G T A C G T G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:YGCTWTGAWGTGCAAA-
--CTTTGTTATGCAAAT
 A G T C T A C G A T G C C G A T G C A T A C G T A C T G C G T A C G A T T C A G C G A T T C A G A G T C C G T A T C G A C T G A A C G T
A C G T A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-YGCTWTGAWGTGCAAA
TNCCTTTGATGT-----
 A C G T A G T C T A C G A T G C C G A T G C A T A C G T A C T G C G T A C G A T T C A G C G A T T C A G A G T C C G T A T C G A C T G A
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---YGCTWTGAWGTGCAAA
NNTTCCTTTGATCTANA--
 A C G T A C G T A C G T A G T C T A C G A T G C C G A T G C A T A C G T A C T G C G T A C G A T T C A G C G A T T C A G A G T C C G T A T C G A C T G A
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-YGCTWTGAWGTGCAAA
TNCCTTTGATCTTN---
 A C G T A G T C T A C G A T G C C G A T G C A T A C G T A C T G C G T A C G A T T C A G C G A T T C A G A G T C C G T A T C G A C T G A
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---YGCTWTGAWGTGCAAA
ATTTCCTTTGATCTATA--
 A C G T A C G T A C G T A G T C T A C G A T G C C G A T G C A T A C G T A C T G C G T A C G A T T C A G C G A T T C A G A G T C C G T A T C G A C T G A
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---YGCTWTGAWGTGCAAA
NNTTCCTTTGATCTNNA--
 A C G T A C G T A C G T A G T C T A C G A T G C C G A T G C A T A C G T A C T G C G T A C G A T T C A G C G A T T C A G A G T C C G T A T C G A C T G A
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---YGCTWTGAWGTGCAAA
AATCCCTTTGATCTATC--
 A C G T A C G T A C G T A G T C T A C G A T G C C G A T G C A T A C G T A C T G C G T A C G A T T C A G C G A T T C A G A G T C C G T A T C G A C T G A
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C A C G T A C G T