Information for 16-GAGCCAAYKGTGT (Motif 21)

A C T G C T G A A C T G T G A C G T A C C G T A C G T A A G C T A C G T A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C G T C A C T G A A C G T A C G T A C T G A C T G A G T C A G C T A G T C
p-value:1e-9
log p-value:-2.137e+01
Information Content per bp:1.912
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.0 +/- 19.4bp
Average Position of motif in Background63.3 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGCCAAYKGTGT
CGTGCCAAG-----
 A C G T A C T G C T G A A C T G T G A C G T A C C G T A C G T A A G C T A C G T A C T G A C G T A C T G A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGCCAAYKGTGT
-TGCCAA------
 A C T G C T G A A C T G T G A C G T A C C G T A C G T A A G C T A C G T A C T G A C G T A C T G A C G T
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGCCAAYKGTGT
-AGCCAATCGG--
 A C T G C T G A A C T G T G A C G T A C C G T A C G T A A G C T A C G T A C T G A C G T A C T G A C G T
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAGCCAAYKGTGT---
-NNNCCATTGTGTNAN
 A C T G C T G A A C T G T G A C G T A C C G T A C G T A A G C T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0177.1_Sox7_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGCCAAYKGTGT---------
GTGCTAATTGTGTGTGTACGCT
 A C T G C T G A A C T G T G A C G T A C C G T A C G T A A G C T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGCCAAYKGTGT
ACTAGCCAATCA---
 A C G T A C G T A C T G C T G A A C T G T G A C G T A C C G T A C G T A A G C T A C G T A C T G A C G T A C T G A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGCCAAYKGTGT
GGTGCCAAGT----
 A C G T A C T G C T G A A C T G T G A C G T A C C G T A C G T A A G C T A C G T A C T G A C G T A C T G A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GAGCCAAYKGTGT
CCTTCGGCGCCAAAAGG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C T G T G A C G T A C C G T A C G T A A G C T A C G T A C T G A C G T A C T G A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GAGCCAAYKGTGT---
CNGACACCTGTTCNNN
 A C T G C T G A A C T G T G A C G T A C C G T A C G T A A G C T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAGCCAAYKGTGT
CAGCC--------
 A C T G C T G A A C T G T G A C G T A C C G T A C G T A A G C T A C G T A C T G A C G T A C T G A C G T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T