Information for 10-CAHTAGCACCTCA (Motif 10)

A G T C C G T A G A C T A C G T G T C A A C T G A G T C C G T A A T G C A G T C A C G T A G T C G T C A
Reverse Opposite:
A C G T C T A G C G T A A C T G A T C G A C G T A C T G G T A C A C G T C G T A C G T A A C G T A C T G
p-value:1e-13
log p-value:-3.097e+01
Information Content per bp:1.869
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 30.3bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CAHTAGCACCTCA
-ATTAACACCT--
 A G T C C G T A G A C T A C G T G T C A A C T G A G T C C G T A A T G C A G T C A C G T A G T C G T C A
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CAHTAGCACCTCA
---TGACACCT--
 A G T C C G T A G A C T A C G T G T C A A C T G A G T C C G T A A T G C A G T C A C G T A G T C G T C A
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAHTAGCACCTCA
---TCACACCT--
 A G T C C G T A G A C T A C G T G T C A A C T G A G T C C G T A A T G C A G T C A C G T A G T C G T C A
A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAHTAGCACCTCA
--TTMACACCTT-
 A G T C C G T A G A C T A C G T G T C A A C T G A G T C C G T A A T G C A G T C A C G T A G T C G T C A
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CAHTAGCACCTCA-
----ATCACCCCAC
 A G T C C G T A G A C T A C G T G T C A A C T G A G T C C G T A A T G C A G T C A C G T A G T C G T C A A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAHTAGCACCTCA
---TCACACCT--
 A G T C C G T A G A C T A C G T G T C A A C T G A G T C C G T A A T G C A G T C A C G T A G T C G T C A
A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CAHTAGCACCTCA-
----ATCACCCCAT
 A G T C C G T A G A C T A C G T G T C A A C T G A G T C C G T A A T G C A G T C A C G T A G T C G T C A A C G T
A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

TBX15/MA0803.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAHTAGCACCTCA
---TCACACCT--
 A G T C C G T A G A C T A C G T G T C A A C T G A G T C C G T A A T G C A G T C A C G T A G T C G T C A
A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAHTAGCACCTCA
-TTTCACACCTN-
 A G T C C G T A G A C T A C G T G T C A A C T G A G T C C G T A A T G C A G T C A C G T A G T C G T C A
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAHTAGCACCTCA
---TCACACCT--
 A G T C C G T A G A C T A C G T G T C A A C T G A G T C C G T A A T G C A G T C A C G T A G T C G T C A
A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T