Information for 8-CHGCGCAGRSCCC (Motif 9)

A T G C G C T A A C T G A T G C A T C G A G T C C T G A A C T G C T A G T A G C A G T C A T G C G A T C
Reverse Opposite:
C T A G A T C G T C A G A T C G G A T C A G T C A G C T A C T G A T G C T A C G A G T C C G A T A T C G
p-value:1e-10
log p-value:-2.528e+01
Information Content per bp:1.740
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.81%
Number of Background Sequences with motif377.7
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets54.7 +/- 25.3bp
Average Position of motif in Background50.7 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CHGCGCAGRSCCC
GCCGCGCAGTGCGT
 A C G T A T G C G C T A A C T G A T G C A T C G A G T C C T G A A C T G C T A G T A G C A G T C A T G C G A T C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CHGCGCAGRSCCC
-TGCGCAGGCGC-
 A T G C G C T A A C T G A T G C A T C G A G T C C T G A A C T G C T A G T A G C A G T C A T G C G A T C
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CHGCGCAGRSCCC
CTGCGCATGCGC-
 A T G C G C T A A C T G A T G C A T C G A G T C C T G A A C T G C T A G T A G C A G T C A T G C G A T C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CHGCGCAGRSCCC
-TGCCCAGNHW--
 A T G C G C T A A C T G A T G C A T C G A G T C C T G A A C T G C T A G T A G C A G T C A T G C G A T C
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CHGCGCAGRSCCC
GTGCGCATGCGC-
 A T G C G C T A A C T G A T G C A T C G A G T C C T G A A C T G C T A G T A G C A G T C A T G C G A T C
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CHGCGCAGRSCCC
--GGGCGGGACC-
 A T G C G C T A A C T G A T G C A T C G A G T C C T G A A C T G C T A G T A G C A G T C A T G C G A T C
A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CHGCGCAGRSCCC
---CACAGN----
 A T G C G C T A A C T G A T G C A T C G A G T C C T G A A C T G C T A G T A G C A G T C A T G C G A T C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CHGCGCAGRSCCC
-GGCCCCGCCCCC
 A T G C G C T A A C T G A T G C A T C G A G T C C T G A A C T G C T A G T A G C A G T C A T G C G A T C
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CHGCGCAGRSCCC
--GCTCGGSCTC-
 A T G C G C T A A C T G A T G C A T C G A G T C C T G A A C T G C T A G T A G C A G T C A T G C G A T C
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CHGCGCAGRSCCC
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A T G C G C T A A C T G A T G C A T C G A G T C C T G A A C T G C T A G T A G C A G T C A T G C G A T C
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C